RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 GPR158Q5T848 1215 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 ISCA2Q86U28 154 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 FCRL5Q96RD9 977 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 TUBB1Q9H4B7 451 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 PIF1Q9H611 641 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 RMND5AQ9H871 391 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 KLHL3Q9UH77 587 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 POLG2Q9UHN1 485 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 FAM47E-STBD1D6RA91 191 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 CLDN5O00501 218 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 AXIN1O15169 862 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 INMTO95050 263 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 CDH1P12830 882 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 DIO3P55073 304 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 GP2P55259 537 aaKnown RBP19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 TPD52P55327 224 aaPredicted RBP19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 KCNK10P57789 538 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 NFKB2Q00653 900 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 PRKCZQ05513 592 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 TTC23Q5W5X9 447 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 KANK2Q63ZY3 851 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 TMEM207Q6UWW9 146 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 PROSER1Q86XN7 944 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 SCML4Q8N228 414 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 ZCCHC7Q8N3Z6 543 aaKnown RBP19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 PNPLA1Q8N8W4 532 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 PIK3C3Q8NEB9 887 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 TMEM40Q8WWA1 233 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 EXT2Q93063 718 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 ZNF419Q96HQ0 510 aaPredicted RBP19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 KCNA7Q96RP8 456 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 PCDHB3Q9Y5E6 796 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 SNX5Q9Y5X3 404 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 PRSS23O95084 383 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 LINC00032P0C843 101 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 BMP4P12644 408 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 ITIH1P19827 911 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 CES1P23141 567 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 HTR1EP28566 365 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 SF3B4Q15427 424 aaKnown RBP eCLIP19.2■□□□□ 0.661e-7■■□□□ 13.7
SNAPC3-206ENST00000490969 FBXO47Q5MNV8 452 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 ARHGAP36Q6ZRI8 547 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 TSPEARQ8WU66 669 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 DNAJB3Q8WWF6 145 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 SOCS4Q8WXH5 440 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 CCDC97Q96F63 343 aaPredicted RBP19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 AURKBQ96GD4 344 aaPredicted RBP19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 NSMCE2Q96MF7 247 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 OSMRQ99650 979 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 GLOD4Q9HC38 313 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 LTB4R2Q9NPC1 389 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 GPR45Q9Y5Y3 372 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 ANKRD12Q6UB98 2062 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 GPR32O75388 356 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 DNAJB5O75953 348 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 NPR3P17342 541 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 OR4D2P58180 307 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 ADAM17P78536 824 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 RCAN2Q14206 197 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 ARL13BQ3SXY8 428 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 KDELC2Q7Z4H8 507 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 OR7A2PQ8NGA2 310 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 TEX37Q96LM6 180 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 ASB2Q96Q27 587 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 ATXN3LQ9H3M9 355 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 FAM118AQ9NWS6 357 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 DDIT4Q9NX09 232 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 SLAMF8Q9P0V8 285 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 KLQ9UEF7 1012 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 OR12D3Q9UGF7 316 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 BTRCQ9Y297 605 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 ATP11BQ9Y2G3 1177 aa19.2■□□□□ 0.66
SNAPC3-206ENST00000490969 HAS3O00219 553 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 NDUFS2O75306 463 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 PMPCBO75439 489 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 LRIG2O94898 1065 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 SIX3O95343 332 aaPredicted RBP19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 ADRA1AP35348 466 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 CASP2P42575 452 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 PSEN2P49810 448 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 ECT2LQ008S8 904 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 FXNQ16595 210 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 CTU2Q2VPK5 515 aaKnown RBP19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 PAGE2BQ5JRK9 111 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 PTGR2Q8N8N7 351 aaPredicted RBP19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 PTERQ96BW5 349 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 PRKD2Q9BZL6 878 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 FBXO8Q9NRD0 319 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 TYW5A2RUC4 315 aaKnown RBP19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 A8MU76 341 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 DFFAO00273 331 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 TBC1D4O60343 1298 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 EEDO75530 441 aaKnown RBP19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 GABARAPO95166 117 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 HPRP00739 348 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 PTPN2P17706 415 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 HOXA11P31270 313 aaPredicted RBP19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 GLYATQ6IB77 296 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 SLC22A16Q86VW1 577 aa19.19■□□□□ 0.66
SNAPC3-206ENST00000490969 B3GALNT2Q8NCR0 500 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms