RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ANKRD20A2Q5SQ80 823 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 ANKRD20A1Q5TYW2 823 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 ANKRD20A3Q5VUR7 823 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 CLEC14AQ86T13 490 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 LRRTM4Q86VH4 590 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 SFRP1Q8N474 314 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 OR10G6Q8NH81 332 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 SLC37A2Q8TED4 501 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 PRR11Q96HE9 360 aaPredicted RBP17.25■□□□□ 0.35
SEC13-218ENST00000490283 VPS35Q96QK1 796 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 FICDQ9BVA6 458 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 TSGA10Q9BZW7 698 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 ZCCHC2Q9C0B9 1178 aaKnown RBP17.25■□□□□ 0.35
SEC13-218ENST00000490283 C10orf88Q9H8K7 445 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 PISDQ9UG56 409 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 CHD6Q8TD26 2715 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 KIR2DS5A0A0G2JLQ3 304 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 A0A0G2JNG1 304 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 CDRT15L2A8MXV6 281 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 KIR2DS3K7RE56 304 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 PPM1DO15297 605 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 KLK10O43240 276 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 CDK14O94921 469 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 FTCDO95954 541 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 VCLP18206 1134 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 TMPRSS3P57727 454 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 ITGA9Q13797 1035 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 KIR2DS5Q14953 304 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 CRTC3Q6UUV7 619 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 USP53Q70EK8 1073 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 ADGRG6Q86SQ4 1221 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 SLITRK4Q8IW52 837 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 TTC30BQ8N4P2 665 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 BRSK1Q8TDC3 778 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 SPATA13Q96N96 652 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 FCRL3Q96P31 734 aaPredicted RBP17.24■□□□□ 0.35
SEC13-218ENST00000490283 FAM118BQ9BPY3 351 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.24■□□□□ 0.35
SEC13-218ENST00000490283 KLC4Q9NSK0 619 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 TRIM10Q9UDY6 481 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 TBC1D29Q9UFV1 150 aa17.24■□□□□ 0.35
SEC13-218ENST00000490283 ADAMTS20P59510 1910 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 IGHV1OR21-1A0A087WYE8 117 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 GLYATL1P3A0A0U1RQE8 302 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 PMS2P1A4D2B8 440 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 C2orf81A6NN90 581 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 HGSO14964 777 aaPredicted RBP17.23■□□□□ 0.35
SEC13-218ENST00000490283 STX7O15400 261 aaKnown RBP17.23■□□□□ 0.35
SEC13-218ENST00000490283 KRT86O43790 486 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 DUX1O43812 170 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 F3P13726 295 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 PSMB4P28070 264 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 CD1CP29017 333 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 CLCNKAP51800 687 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 TRA2AQ13595 282 aaKnown RBP eCLIP17.23■□□□□ 0.35
SEC13-218ENST00000490283 PLA2G4EQ3MJ16 856 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 ZNF648Q5T619 568 aaPredicted RBP17.23■□□□□ 0.35
SEC13-218ENST00000490283 TMEM164Q5U3C3 297 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 AADACL2Q6P093 401 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 IYDQ6PHW0 289 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 RNF10Q8N5U6 811 aaKnown RBP17.23■□□□□ 0.35
SEC13-218ENST00000490283 DTX3LQ8TDB6 740 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 NUDT22Q9BRQ3 303 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 TIMM29Q9BSF4 260 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 SEMA6CQ9H3T2 930 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 SARS2Q9NP81 518 aaKnown RBP17.23■□□□□ 0.35
SEC13-218ENST00000490283 WDR70Q9NW82 654 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 IL17CQ9P0M4 197 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 PACSIN2Q9UNF0 486 aaPredicted RBP17.23■□□□□ 0.35
SEC13-218ENST00000490283 PCDHGA7Q9Y5G6 932 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 PCYT1BQ9Y5K3 369 aaPredicted RBP17.23■□□□□ 0.35
SEC13-218ENST00000490283 CFAP47Q6ZTR5 3102 aa17.23■□□□□ 0.35
SEC13-218ENST00000490283 ZFHX4Q86UP3 3567 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 PDZK1P1A8MUH7 402 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 AGRPO00253 132 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 CHUKO15111 745 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 MTX2O75431 263 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 AGTP01019 485 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 HGFP14210 728 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 ZNF7P17097 686 aaPredicted RBP17.22■□□□□ 0.35
SEC13-218ENST00000490283 CXADRP78310 365 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 PDE1BQ01064 536 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 NFATC2Q13469 925 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 ATP13A5Q4VNC0 1218 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 LDLRAP1Q5SW96 308 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 SEL1L2Q5TEA6 688 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 FAM151BQ6UXP7 276 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 ARHGEF18Q6ZSZ5 1173 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 TRAPPC5Q8IUR0 188 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 TRIM48Q8IWZ4 208 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 CCDC112Q8NEF3 446 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 OR4D9Q8NGE8 314 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 CCDC110Q8TBZ0 833 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 UBE2Q2Q8WVN8 375 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 CRELD1Q96HD1 420 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 IL26Q9NPH9 171 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 ADGRG1Q9Y653 693 aa17.22■□□□□ 0.35
SEC13-218ENST00000490283 COL27A1Q8IZC6 1860 aaPredicted RBP17.22■□□□□ 0.35
SEC13-218ENST00000490283 C5orf60A6NFR6 353 aa17.21■□□□□ 0.35
SEC13-218ENST00000490283 EIF4E1BA6NMX2 242 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms