RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 PDE7BQ9NP56 450 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 PLSCR4Q9NRQ2 329 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 GIMAP4Q9NUV9 329 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 ARHGEF38Q9NXL2 777 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 WSB2Q9NYS7 404 aaPredicted RBP3.86□□□□□ -1.79
CD46-216ENST00000490278 MRPL15Q9P015 296 aaKnown RBP3.86□□□□□ -1.79
CD46-216ENST00000490278 MALT1Q9UDY8 824 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 PADI1Q9ULC6 663 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 KCNS2Q9ULS6 477 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 VDAC3Q9Y277 283 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 PTRH2Q9Y3E5 179 aaKnown RBP3.86□□□□□ -1.79
CD46-216ENST00000490278 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.86□□□□□ -1.79
CD46-216ENST00000490278 PTPRCP08575 1304 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 PDS5AQ29RF7 1337 aaKnown RBP3.86□□□□□ -1.79
CD46-216ENST00000490278 IGKV2D-30A0A075B6S6 120 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 A0A0G2JPF8 293 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 MAGEA13PA6NCF6 341 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 LILRA5A6NI73 299 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 HNRNPCL2B2RXH8 293 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 HNRNPCL3B7ZW38 293 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 FIBPO43427 364 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 KCNAB3O43448 404 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 GH2P01242 217 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 HNRNPCL4P0DMR1 293 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 MMP9P14780 707 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 CCKARP32238 428 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 CCKBRP32239 447 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 NNMTP40261 264 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 SUOXP51687 545 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 PNLIPRP2P54317 469 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 RRP1P56182 461 aaKnown RBP3.85□□□□□ -1.79
CD46-216ENST00000490278 SYT16Q17RD7 645 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 LRCH2Q5VUJ6 765 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 TPRG1Q6ZUI0 275 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 RBM23Q86U06 439 aaKnown RBP3.85□□□□□ -1.79
CD46-216ENST00000490278 KBTBD6Q86V97 674 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 PM20D2Q8IYS1 436 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 C1orf87Q8N0U7 546 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 RBMXL3Q8N7X1 1067 aaKnown RBP3.85□□□□□ -1.79
CD46-216ENST00000490278 C9orf106Q8NAJ2 232 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 SLC38A9Q8NBW4 561 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 UTP15Q8TED0 518 aaKnown RBP3.85□□□□□ -1.79
CD46-216ENST00000490278 SLC20A1Q8WUM9 679 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 ABTB1Q969K4 478 aaPredicted RBP3.85□□□□□ -1.79
CD46-216ENST00000490278 PIGTQ969N2 578 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 SLC22A18Q96BI1 424 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 CEP295NLQ96MC4 621 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 NEUROD6Q96NK8 337 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 DACH2Q96NX9 599 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 SMC6Q96SB8 1091 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 KIFC3Q9BVG8 833 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 C6orf106Q9H6K1 298 aaPredicted RBP3.85□□□□□ -1.79
CD46-216ENST00000490278 DNAJC18Q9H819 358 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 TMEM30AQ9NV96 361 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 TRMT1Q9NXH9 659 aaKnown RBP3.85□□□□□ -1.79
CD46-216ENST00000490278 CHORDC1Q9UHD1 332 aaPredicted RBP3.85□□□□□ -1.79
CD46-216ENST00000490278 TTLL3Q9Y4R7 772 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 TMEM184BQ9Y519 407 aaPredicted RBP3.85□□□□□ -1.79
CD46-216ENST00000490278 PASKQ96RG2 1323 aa3.85□□□□□ -1.79
CD46-216ENST00000490278 LOC100509620A0A075B734 347 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 TMEM8BA6NDV4 472 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 A8MV72 311 aaPredicted RBP3.84□□□□□ -1.79
CD46-216ENST00000490278 ZNF587BE7ETH6 402 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 ERAL1O75616 437 aaKnown RBP3.84□□□□□ -1.79
CD46-216ENST00000490278 RSL1D1O76021 490 aaKnown RBP3.84□□□□□ -1.79
CD46-216ENST00000490278 PPP1R3DO95685 299 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 NR2F1P10589 423 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 AKR1B1P15121 316 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 MYOD1P15172 320 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 GNL1P36915 607 aaPredicted RBP3.84□□□□□ -1.79
CD46-216ENST00000490278 USP8P40818 1118 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 IFI35P80217 286 aaPredicted RBP3.84□□□□□ -1.79
CD46-216ENST00000490278 SLC20A2Q08357 652 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 KCTD2Q14681 263 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 MVPQ14764 893 aaKnown RBP3.84□□□□□ -1.79
CD46-216ENST00000490278 DLG2Q15700 870 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 C15orf59Q2T9L4 293 aaPredicted RBP3.84□□□□□ -1.79
CD46-216ENST00000490278 ZNF585BQ52M93 769 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 KRT79Q5XKE5 535 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 ZNF324BQ6AW86 544 aaPredicted RBP3.84□□□□□ -1.79
CD46-216ENST00000490278 C16orf82Q7Z2V1 217 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 ATG9AQ7Z3C6 839 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 ARMC9Q7Z3E5 817 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 AACSQ86V21 672 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 SATL1Q86VE3 508 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 SFR1Q86XK3 245 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 LINC00346Q8IVM7 164 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 MAP7D3Q8IWC1 876 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 ODF3L1Q8IXM7 274 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 SCML4Q8N228 414 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 GCSAMQ8N6F7 178 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 KCNH5Q8NCM2 988 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 SLC44A1Q8WWI5 657 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 PRPF31Q8WWY3 499 aaKnown RBP3.84□□□□□ -1.79
CD46-216ENST00000490278 FIG4Q92562 907 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 CDCA5Q96FF9 252 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 PAFAH2Q99487 392 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 RAD21L1Q9H4I0 556 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 UBTD1Q9HAC8 227 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 ANKEF1Q9NU02 776 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms