RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 SFRP1Q8N474 314 aa19.52■□□□□ 0.72
SMC4-222ENST00000490207 TTC13Q8NBP0 860 aa19.52■□□□□ 0.72
SMC4-222ENST00000490207 CCDC110Q8TBZ0 833 aa19.52■□□□□ 0.72
SMC4-222ENST00000490207 CRELD1Q96HD1 420 aa19.52■□□□□ 0.72
SMC4-222ENST00000490207 NAF1Q96HR8 494 aaKnown RBP19.52■□□□□ 0.72
SMC4-222ENST00000490207 HES6Q96HZ4 224 aa19.52■□□□□ 0.72
SMC4-222ENST00000490207 RDH14Q9HBH5 336 aa19.52■□□□□ 0.72
SMC4-222ENST00000490207 IL17CQ9P0M4 197 aa19.52■□□□□ 0.72
SMC4-222ENST00000490207 TBC1D29Q9UFV1 150 aa19.52■□□□□ 0.72
SMC4-222ENST00000490207 AAR2Q9Y312 384 aaKnown RBP19.52■□□□□ 0.72
SMC4-222ENST00000490207 PKP3Q9Y446 797 aa19.52■□□□□ 0.72
SMC4-222ENST00000490207 LOXL2Q9Y4K0 774 aa19.52■□□□□ 0.72
SMC4-222ENST00000490207 NBEAQ8NFP9 2946 aa19.52■□□□□ 0.72
SMC4-222ENST00000490207 TRBV23OR9-2A0A075B6M9 112 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 CDRT15L2A8MXV6 281 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 CHUKO15111 745 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 SNX2O60749 519 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 HGFP14210 728 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 SLC2A4P14672 509 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 UGT1A5P35504 534 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 CLPPQ16740 277 aaPredicted RBP19.51■□□□□ 0.71
SMC4-222ENST00000490207 ATP13A5Q4VNC0 1218 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 FAM151BQ6UXP7 276 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 CLEC14AQ86T13 490 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 PIM3Q86V86 326 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 LRRTM4Q86VH4 590 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 SPACA3Q8IXA5 215 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 RNF10Q8N5U6 811 aaKnown RBP19.51■□□□□ 0.71
SMC4-222ENST00000490207 GDAP1Q8TB36 358 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 KCNE4Q8WWG9 221 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 PPP1R2P1Q96PQ5 205 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 NUDT22Q9BRQ3 303 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 ZMYND15Q9H091 742 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 STN1Q9H668 368 aaKnown RBP19.51■□□□□ 0.71
SMC4-222ENST00000490207 KCNK4Q9NYG8 393 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.51■□□□□ 0.71
SMC4-222ENST00000490207 TMPRSS11EQ9UL52 423 aa19.51■□□□□ 0.71
SMC4-222ENST00000490207 BPTFQ12830 3046 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 IGHV1OR21-1A0A087WYE8 117 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 A6NCN8 305 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 KMOO15229 486 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 BUD23O43709 281 aaKnown RBP19.5■□□□□ 0.71
SMC4-222ENST00000490207 KRT86O43790 486 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 VEGFDO43915 354 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 JMJD7P0C870 316 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 F3P13726 295 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 ADRA1AP35348 466 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 HHEXQ03014 270 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 KLF1Q13351 362 aaPredicted RBP19.5■□□□□ 0.71
SMC4-222ENST00000490207 GTF2H3Q13889 308 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 INSCQ1MX18 579 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 KHDC1Q4VXA5 237 aaKnown RBP19.5■□□□□ 0.71
SMC4-222ENST00000490207 ZNF761Q86XN6 746 aaPredicted RBP19.5■□□□□ 0.71
SMC4-222ENST00000490207 APOL2Q9BQE5 337 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 TIMM29Q9BSF4 260 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 SEMA6CQ9H3T2 930 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 OSGEPL1Q9H4B0 414 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 IL26Q9NPH9 171 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 KLC4Q9NSK0 619 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 PISDQ9UG56 409 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 GUCA1BQ9UMX6 200 aa19.5■□□□□ 0.71
SMC4-222ENST00000490207 ZFYVE26Q68DK2 2539 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 GLYATL1P3A0A0U1RQE8 302 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 AGRPO00253 132 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 STX7O15400 261 aaKnown RBP19.49■□□□□ 0.71
SMC4-222ENST00000490207 ARHGAP6O43182 974 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 PPFIA2O75334 1257 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 CD1CP29017 333 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 PPM1FP49593 454 aaPredicted RBP19.49■□□□□ 0.71
SMC4-222ENST00000490207 CLCNKAP51800 687 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 TLE3Q04726 772 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 OLIG2Q13516 323 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 ITGA9Q13797 1035 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 CHRNA6Q15825 494 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.49■□□□□ 0.71
SMC4-222ENST00000490207 SEL1L2Q5TEA6 688 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 NKAIN2Q5VXU1 208 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 ARHGEF18Q6ZSZ5 1173 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 USP53Q70EK8 1073 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 CCDC112Q8NEF3 446 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 DTX3LQ8TDB6 740 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 TMEM159Q96B96 161 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 SLC38A3Q99624 504 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 TBL1YQ9BQ87 522 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 SARS2Q9NP81 518 aaKnown RBP19.49■□□□□ 0.71
SMC4-222ENST00000490207 ARL5AQ9Y689 179 aa19.49■□□□□ 0.71
SMC4-222ENST00000490207 KIR2DS5A0A0G2JLQ3 304 aa19.48■□□□□ 0.71
SMC4-222ENST00000490207 A0A0G2JNG1 304 aa19.48■□□□□ 0.71
SMC4-222ENST00000490207 KIR2DS3K7RE56 304 aa19.48■□□□□ 0.71
SMC4-222ENST00000490207 GPR39O43194 453 aa19.48■□□□□ 0.71
SMC4-222ENST00000490207 CDK14O94921 469 aa19.48■□□□□ 0.71
SMC4-222ENST00000490207 ZNF7P17097 686 aaPredicted RBP19.48■□□□□ 0.71
SMC4-222ENST00000490207 CSF2RBP32927 897 aa19.48■□□□□ 0.71
SMC4-222ENST00000490207 GPLD1P80108 840 aa19.48■□□□□ 0.71
SMC4-222ENST00000490207 KIR2DS5Q14953 304 aa19.48■□□□□ 0.71
SMC4-222ENST00000490207 TAF1AQ15573 450 aaPredicted RBP19.48■□□□□ 0.71
SMC4-222ENST00000490207 IYDQ6PHW0 289 aa19.48■□□□□ 0.71
SMC4-222ENST00000490207 RANBP10Q6VN20 620 aa19.48■□□□□ 0.71
SMC4-222ENST00000490207 SLC9B2Q86UD5 537 aa19.48■□□□□ 0.71
SMC4-222ENST00000490207 JAMLQ86YT9 394 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms