RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 CALML6Q8TD86 181 aa10.79□□□□□ -0.68
TFF3-203ENST00000489676 LPGAT1Q92604 370 aa10.79□□□□□ -0.68
TFF3-203ENST00000489676 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.79□□□□□ -0.68
TFF3-203ENST00000489676 SCARF2Q96GP6 870 aaPredicted RBP10.79□□□□□ -0.68
TFF3-203ENST00000489676 TCF12Q99081 682 aa10.79□□□□□ -0.68
TFF3-203ENST00000489676 PHOX2BQ99453 314 aa10.79□□□□□ -0.68
TFF3-203ENST00000489676 BOCQ9BWV1 1114 aa10.79□□□□□ -0.68
TFF3-203ENST00000489676 FGF22Q9HCT0 170 aa10.79□□□□□ -0.68
TFF3-203ENST00000489676 PHPT1Q9NRX4 125 aaPredicted RBP10.79□□□□□ -0.68
TFF3-203ENST00000489676 IARS2Q9NSE4 1012 aaKnown RBP10.79□□□□□ -0.68
TFF3-203ENST00000489676 TMEM74BQ9NUR3 256 aa10.79□□□□□ -0.68
TFF3-203ENST00000489676 INTS10Q9NVR2 710 aaKnown RBP10.79□□□□□ -0.68
TFF3-203ENST00000489676 ZDHHC3Q9NYG2 299 aa10.79□□□□□ -0.68
TFF3-203ENST00000489676 ZFATQ9P243 1243 aa10.79□□□□□ -0.68
TFF3-203ENST00000489676 VPS18Q9P253 973 aa10.79□□□□□ -0.68
TFF3-203ENST00000489676 CRLS1Q9UJA2 301 aa10.79□□□□□ -0.68
TFF3-203ENST00000489676 PNMA8BQ9ULN7 279 aaPredicted RBP10.79□□□□□ -0.68
TFF3-203ENST00000489676 SMG5Q9UPR3 1016 aaKnown RBP10.79□□□□□ -0.68
TFF3-203ENST00000489676 PIKFYVEQ9Y2I7 2098 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 PI4KAP42356 2102 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 A0A087WUV0 522 aaPredicted RBP10.78□□□□□ -0.68
TFF3-203ENST00000489676 TMEM202A6NGA9 273 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 CHUKO15111 745 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 VILLO15195 856 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 BCAT2O15382 392 aaPredicted RBP10.78□□□□□ -0.68
TFF3-203ENST00000489676 OR1I1O60431 355 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 DNAJC6O75061 913 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 MTX2O75431 263 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 ERLIN1O75477 346 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 EPN2O95208 641 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 SLC25A14O95258 325 aaPredicted RBP10.78□□□□□ -0.68
TFF3-203ENST00000489676 CEACAM5P06731 702 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 NUDT17P0C025 328 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 THEGLP0DJG4 465 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 RPS3P23396 243 aaKnown RBP eCLIP10.78□□□□□ -0.688e-6■■■■■ 30.2
TFF3-203ENST00000489676 GCAP28676 217 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 CD38P28907 300 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 LEPRP48357 1165 aaKnown RBP10.78□□□□□ -0.68
TFF3-203ENST00000489676 AFF3P51826 1226 aaKnown RBP10.78□□□□□ -0.68
TFF3-203ENST00000489676 ADARP55265 1226 aaKnown RBP10.78□□□□□ -0.68
TFF3-203ENST00000489676 NXPH1P58417 271 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 FOXK2Q01167 660 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 BNC1Q01954 994 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 ZNF648Q5T619 568 aaPredicted RBP10.78□□□□□ -0.68
TFF3-203ENST00000489676 RNF187Q5TA31 235 aaPredicted RBP10.78□□□□□ -0.68
TFF3-203ENST00000489676 MACC1Q6ZN28 852 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 PRR23BQ6ZRT6 265 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 Q6ZSR6 202 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 TAS2R42Q7RTR8 314 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 ADGRG6Q86SQ4 1221 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 SLC26A11Q86WA9 606 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 SYT12Q8IV01 421 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 RGL4Q8IZJ4 473 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 RBFAQ8N0V3 343 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 OTUD6BQ8N6M0 293 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 SUMF1Q8NBK3 374 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 UHMK1Q8TAS1 419 aaKnown RBP10.78□□□□□ -0.68
TFF3-203ENST00000489676 UBLCP1Q8WVY7 318 aaPredicted RBP10.78□□□□□ -0.68
TFF3-203ENST00000489676 LOXL4Q96JB6 756 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 CYTH2Q99418 400 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 COPS8Q99627 209 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 DHRS4Q9BTZ2 278 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 MIR1-1HGQ9H1L0 117 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 P2RY12Q9H244 342 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 TRIM39Q9HCM9 518 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 ARFGAP3Q9NP61 516 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 FBXO6Q9NRD1 293 aaPredicted RBP10.78□□□□□ -0.68
TFF3-203ENST00000489676 AASDHPPTQ9NRN7 309 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 ATXN10Q9UBB4 475 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 SLC17A4Q9Y2C5 497 aa10.78□□□□□ -0.68
TFF3-203ENST00000489676 PCYT1BQ9Y5K3 369 aaPredicted RBP10.78□□□□□ -0.68
TFF3-203ENST00000489676 ZNF292O60281 2723 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 SPTY2D1-AS1A0A0U1RR47 76 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 A0A1B0GTW7 788 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 GPR89AB7ZAQ6 455 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 CACNB4O00305 520 aaPredicted RBP10.77□□□□□ -0.69
TFF3-203ENST00000489676 PRMT5O14744 637 aaPredicted RBP10.77□□□□□ -0.69
TFF3-203ENST00000489676 VEGFDO43915 354 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 AHSGP02765 367 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 FUCA1P04066 466 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 SHBGP04278 402 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 GPR89BP0CG08 455 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 NBL1P41271 181 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 DPP6P42658 865 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 NSG1P42857 185 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 PRLHRP49683 370 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 CTSCP53634 463 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 PDE1CQ14123 709 aaPredicted RBP10.77□□□□□ -0.69
TFF3-203ENST00000489676 FZD2Q14332 565 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 STAT4Q14765 748 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 LPAL2Q16609 132 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 KLHL38Q2WGJ6 581 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 BCL7AQ4VC05 210 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 CTSL3PQ5NE16 218 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 LYPLAL1Q5VWZ2 237 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 CNSTQ6PJW8 725 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 XKR5Q6UX68 686 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 C11orf96Q7Z7L8 435 aa10.77□□□□□ -0.69
TFF3-203ENST00000489676 SDCCAG8Q86SQ7 713 aaPredicted RBP10.77□□□□□ -0.69
TFF3-203ENST00000489676 LRRC6Q86X45 466 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms