RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 VEZTQ9HBM0 779 aa2.82□□□□□ -1.96
CPSF3-205ENST00000489629 ZBTB20Q9HC78 741 aaPredicted RBP2.82□□□□□ -1.96
CPSF3-205ENST00000489629 GJD2Q9UKL4 321 aa2.82□□□□□ -1.96
CPSF3-205ENST00000489629 CYP46A1Q9Y6A2 500 aa2.82□□□□□ -1.96
CPSF3-205ENST00000489629 DGKBQ9Y6T7 804 aa2.82□□□□□ -1.96
CPSF3-205ENST00000489629 KDM3AQ9Y4C1 1321 aa2.82□□□□□ -1.96
CPSF3-205ENST00000489629 DISP3Q9P2K9 1392 aa2.82□□□□□ -1.96
CPSF3-205ENST00000489629 A0A0G2JLW4 131 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 SERINC4A6NH21 518 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 PSMD14O00487 310 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 HOXC11O43248 304 aaPredicted RBP2.81□□□□□ -1.96
CPSF3-205ENST00000489629 MLYCDO95822 493 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 IL7RP16871 459 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 MSH3P20585 1137 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 MCCP23508 829 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 CLK1P49759 484 aaKnown RBP2.81□□□□□ -1.96
CPSF3-205ENST00000489629 MLLT10P55197 1068 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 MBTD1Q05BQ5 628 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 NEXNQ0ZGT2 675 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 ITGA9Q13797 1035 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 CDONQ4KMG0 1287 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 FAM69AQ5T7M9 428 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 GTSCR1Q86UQ5 136 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 NFKBIDQ8NI38 313 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 ZNF473Q8WTR7 871 aaKnown RBP2.81□□□□□ -1.96
CPSF3-205ENST00000489629 HTRA1Q92743 480 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 HARBI1Q96MB7 349 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 CDK19Q9BWU1 502 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 SLC25A18Q9H1K4 315 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 BICC1Q9H694 974 aaKnown RBP2.81□□□□□ -1.96
CPSF3-205ENST00000489629 MAGIXQ9H6Y5 334 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 PRKRIP1Q9H875 184 aaPredicted RBP2.81□□□□□ -1.96
CPSF3-205ENST00000489629 OR14J1Q9UGF5 321 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.81□□□□□ -1.96
CPSF3-205ENST00000489629 MKLN1Q9UL63 735 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 NAALADL1Q9UQQ1 740 aa2.81□□□□□ -1.96
CPSF3-205ENST00000489629 ANKRD66B4E2M5 251 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 TMEM178BH3BS89 294 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 SLC22A2O15244 555 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 CAVIN2O95810 425 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 IGHV4-38-2P0DP08 117 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 ABCD3P28288 659 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 PAFAH1B1P43034 410 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 LMO4P61968 165 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 NSUN5P2Q63ZY6 315 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 INO80CQ6PI98 192 aaPredicted RBP2.8□□□□□ -1.96
CPSF3-205ENST00000489629 ZNF653Q96CK0 615 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 SAAL1Q96ER3 474 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 ART5Q96L15 291 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 LINC00479Q96M42 142 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 TMEM68Q96MH6 324 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 OPRPNQ99935 248 aaPredicted RBP2.8□□□□□ -1.96
CPSF3-205ENST00000489629 SLC28A3Q9HAS3 691 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 TRPC7Q9HCX4 862 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 OGFRQ9NZT2 677 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 TMEM181Q9P2C4 612 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 JRKLQ9Y4A0 524 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 CLIC4Q9Y696 253 aa2.8□□□□□ -1.96
CPSF3-205ENST00000489629 CCDC196A0A1B0GTZ2 297 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 C1orf226A1L170 272 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 DUXAA6NLW8 204 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 H0YIN7 160 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 TCERG1O14776 1098 aaKnown RBP2.79□□□□□ -1.96
CPSF3-205ENST00000489629 BUD23O43709 281 aaKnown RBP2.79□□□□□ -1.96
CPSF3-205ENST00000489629 NKX2-2O95096 273 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 NR3C1P04150 777 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 TFAP2AP05549 437 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 EPHA8P29322 1005 aaPredicted RBP2.79□□□□□ -1.96
CPSF3-205ENST00000489629 CTCFP49711 727 aaPredicted RBP2.79□□□□□ -1.96
CPSF3-205ENST00000489629 EIF3BP55884 814 aaKnown RBP2.79□□□□□ -1.96
CPSF3-205ENST00000489629 DCTN2Q13561 401 aaKnown RBP2.79□□□□□ -1.96
CPSF3-205ENST00000489629 TMEM187Q14656 261 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 KIAA1644Q3SXP7 199 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 ZFP69Q49AA0 526 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 CDC73Q6P1J9 531 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 LONP2Q86WA8 852 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 SLC38A9Q8NBW4 561 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 OR1J2Q8NGS2 313 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 UTP15Q8TED0 518 aaKnown RBP2.79□□□□□ -1.96
CPSF3-205ENST00000489629 ST8SIA4Q92187 359 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 POM121L2Q96KW2 1035 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 SLX1AQ9BQ83 275 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 STRA6Q9BX79 667 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 SIL1Q9H173 461 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 RANBP17Q9H2T7 1088 aaKnown RBP2.79□□□□□ -1.96
CPSF3-205ENST00000489629 FGF22Q9HCT0 170 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 PCDHB16Q9NRJ7 776 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 ZDHHC18Q9NUE0 388 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 PAK5Q9P286 719 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 COPG2Q9UBF2 871 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 UBA2Q9UBT2 640 aaPredicted RBP2.79□□□□□ -1.96
CPSF3-205ENST00000489629 CACNG5Q9UF02 275 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 CNOT8Q9UFF9 292 aaKnown RBP2.79□□□□□ -1.96
CPSF3-205ENST00000489629 RASAL2Q9UJF2 1139 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 CAMK2AQ9UQM7 478 aa2.79□□□□□ -1.96
CPSF3-205ENST00000489629 A0A1W2PRG0 241 aa2.78□□□□□ -1.96
CPSF3-205ENST00000489629 A6NL46 340 aa2.78□□□□□ -1.96
CPSF3-205ENST00000489629 TGFB1I1O43294 461 aa2.78□□□□□ -1.96
CPSF3-205ENST00000489629 ARHGEF9O43307 516 aa2.78□□□□□ -1.96
CPSF3-205ENST00000489629 PAGE4O60829 102 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms