RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 EIF4EBP2Q13542 120 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 CDH18Q13634 790 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 HADHQ16836 314 aaKnown RBP8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 FAM133BQ5BKY9 247 aaKnown RBP8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 TMEM196Q5HYL7 178 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 MS4A13Q5J8X5 152 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 OTUD1Q5VV17 481 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 TCEAL6Q6IPX3 200 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 TRNP1Q6NT89 227 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 RFWD3Q6PCD5 774 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 SLFN11Q7Z7L1 901 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 KBTBD6Q86V97 674 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 MFN1Q8IWA4 741 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 C17orf53Q8N3J3 647 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 OR7D4Q8NG98 312 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 UCMAQ8WVF2 138 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 TCEAL3Q969E4 200 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 NTAN1Q96AB6 310 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 CHFRQ96EP1 664 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 C1orf74Q96LT6 269 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 RPRD1AQ96P16 312 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 BBC3Q96PG8 261 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 GPHA2Q96T91 129 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 EIF3CQ99613 913 aaKnown RBP8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 LANCL2Q9NS86 450 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 PLK2Q9NYY3 685 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 NENFQ9UMX5 172 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 HS3ST4Q9Y661 456 aa8.19□□□□□ -1.1
TRAPPC12-221ENST00000489032 SMG1Q96Q15 3661 aaKnown RBP8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 FREM2Q5SZK8 3169 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 H0Y626 953 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 SRGAP2O75044 1071 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 ATG13O75143 517 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 MOCS3O95396 460 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 LCA5LO95447 670 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 PLATP00750 562 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 TNNT1P13805 278 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 SLC6A4P31645 630 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 ADRA1BP35368 520 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 PCK1P35558 622 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 OPRD1P41143 372 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 ARHGAP25P42331 645 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 TNFRSF4P43489 277 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 HDAC4P56524 1084 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 ZNF177Q13360 481 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 ZFYVE27Q5T4F4 411 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 NXNQ6DKJ4 435 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 NADSYN1Q6IA69 706 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 FBXL22Q6P050 247 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 USP45Q70EL2 814 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 BNIPLQ7Z465 357 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 TRMT11Q7Z4G4 463 aaKnown RBP8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 ANKS1BQ7Z6G8 1248 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 KIAA1328Q86T90 577 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 CFAP52Q8N1V2 620 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 CARNMT1Q8N4J0 409 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 CCHCR1Q8TD31 782 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 WFIKKN2Q8TEU8 576 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 RFFLQ8WZ73 363 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 CFHR4Q92496 578 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 ARHGEF26Q96DR7 871 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 PACSIN1Q9BY11 444 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 TMEM140Q9NV12 185 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 DONSONQ9NYP3 566 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 CALCOCO1Q9P1Z2 691 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 XPO7Q9UIA9 1087 aaKnown RBP8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 KLK13Q9UKR3 277 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 VANGL2Q9ULK5 521 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 PCDHA13Q9Y5I0 950 aa8.18□□□□□ -1.1
TRAPPC12-221ENST00000489032 A0A1B0GVM2 712 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 TMEM110-MUSTN1A8MSY1 372 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 E9PAM4 449 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 TIMM44O43615 452 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 AP1G1O43747 822 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 CLDN11O75508 207 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 LUC7L3O95232 432 aaKnown RBP8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 EGFP01133 1207 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 HOXD9P28356 352 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 MIPP30301 263 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 HTR7P34969 479 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 ZNF135P52742 658 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 NAP1L1P55209 391 aaKnown RBP8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 CDH4P55283 916 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 RPS24P62847 133 aaKnown RBP8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 MRPS21P82921 87 aaKnown RBP8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 OGDHQ02218 1023 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 SCAPQ12770 1279 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 SLC12A1Q13621 1099 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 DMC1Q14565 340 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 GFOD2Q3B7J2 385 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 BOLA3Q53S33 107 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 ODF2Q5BJF6 829 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 ERMARDQ5T6L9 678 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 RWDD4Q6NW29 188 aaKnown RBP8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 CHST9Q7L1S5 443 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 LURAP1LQ8IV03 231 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 PSTKQ8IV42 348 aaKnown RBP8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 NIPA2Q8N8Q9 360 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 TERB1Q8NA31 727 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms