RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 MTX2O75431 263 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 ADRB1P08588 477 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 MLNP12872 115 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 CKMT2P17540 419 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 FOXN2P32314 431 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 CTBSQ01459 385 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 DNAJC3Q13217 504 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 LAMB3Q13751 1172 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 DHX34Q14147 1143 aaKnown RBP18.43■□□□□ 0.54
PTCD3-217ENST00000488801 LDLRAP1Q5SW96 308 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 N4BP2L1Q5TBK1 243 aaPredicted RBP18.43■□□□□ 0.54
PTCD3-217ENST00000488801 OGFOD3Q6PK18 319 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 NLRP9Q7RTR0 991 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 C11orf96Q7Z7L8 435 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 C17orf82Q86X59 251 aaPredicted RBP18.43■□□□□ 0.54
PTCD3-217ENST00000488801 NXPE1Q8N323 547 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 SPATA4Q8NEY3 305 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 GPR156Q8NFN8 814 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 GSDMCQ9BYG8 508 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 SLC2A6Q9UGQ3 507 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 MOSPD1Q9UJG1 213 aa18.43■□□□□ 0.54
PTCD3-217ENST00000488801 DNALI1O14645 258 aaPredicted RBP18.42■□□□□ 0.54
PTCD3-217ENST00000488801 TP73O15350 636 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 NOBOXO60393 691 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 ASMTLO95671 621 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 ITGALP20701 1170 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 AK4P27144 223 aaPredicted RBP18.42■□□□□ 0.54
PTCD3-217ENST00000488801 MC4RP32245 332 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 NPY2RP49146 381 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 CLCNKAP51800 687 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 TMPRSS15P98073 1019 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 B4GALNT1Q00973 533 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 DR1Q01658 176 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 ILF3Q12906 894 aaKnown RBP eCLIP18.42■□□□□ 0.54
PTCD3-217ENST00000488801 PPP1R7Q15435 360 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 SKIDA1Q1XH10 827 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 GPR33Q49SQ1 333 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 PCID2Q5JVF3 399 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 MARK2Q7KZI7 788 aaKnown RBP18.42■□□□□ 0.54
PTCD3-217ENST00000488801 KLHL7Q8IXQ5 586 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 PPIL6Q8IXY8 311 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 ARL10Q8N8L6 244 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 KYQ8NBH2 561 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 CCDC97Q96F63 343 aaPredicted RBP18.42■□□□□ 0.54
PTCD3-217ENST00000488801 SERPINB12Q96P63 405 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 KIFC1Q9BW19 673 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 ASB8Q9H765 288 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 SUDS3Q9H7L9 328 aaPredicted RBP18.42■□□□□ 0.54
PTCD3-217ENST00000488801 XAB2Q9HCS7 855 aaKnown RBP18.42■□□□□ 0.54
PTCD3-217ENST00000488801 SYBUQ9NX95 663 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 NCKIPSDQ9NZQ3 722 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 PLEKHM1Q9Y4G2 1056 aa18.42■□□□□ 0.54
PTCD3-217ENST00000488801 AKAP13Q12802 2813 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 A6NCN8 305 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 GRID2O43424 1007 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 SGTAO43765 313 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 TUBB4AP04350 444 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 MGAT1P26572 445 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 PMLP29590 882 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 SESN2P58004 480 aaPredicted RBP18.41■□□□□ 0.54
PTCD3-217ENST00000488801 CRADDP78560 199 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 TMEM115Q12893 351 aaPredicted RBP18.41■□□□□ 0.54
PTCD3-217ENST00000488801 ILKQ13418 452 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 TCEA2Q15560 299 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 RAB44Q7Z6P3 723 aaPredicted RBP18.41■□□□□ 0.54
PTCD3-217ENST00000488801 TAF8Q7Z7C8 310 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 HOOK3Q86VS8 718 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 PIANPQ8IYJ0 282 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 AGGF1Q8N302 714 aaeCLIP18.41■□□□□ 0.54
PTCD3-217ENST00000488801 PPHLN1Q8NEY8 458 aaKnown RBP18.41■□□□□ 0.54
PTCD3-217ENST00000488801 ADAMTS14Q8WXS8 1223 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 ULK4Q96C45 1275 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 TRIM44Q96DX7 344 aaPredicted RBP18.41■□□□□ 0.54
PTCD3-217ENST00000488801 TIMM29Q9BSF4 260 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 TRIM51Q9BSJ1 452 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 ZCCHC2Q9C0B9 1178 aaKnown RBP18.41■□□□□ 0.54
PTCD3-217ENST00000488801 BFARQ9NZS9 450 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 TAAR2Q9P1P5 351 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 CDC23Q9UJX2 597 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 SOX13Q9UN79 622 aa18.41■□□□□ 0.54
PTCD3-217ENST00000488801 MED19A0JLT2 244 aaPredicted RBP18.4■□□□□ 0.54
PTCD3-217ENST00000488801 CCDC162PA2VCL2 907 aa18.4■□□□□ 0.54
PTCD3-217ENST00000488801 EME2A4GXA9 379 aaPredicted RBP18.4■□□□□ 0.54
PTCD3-217ENST00000488801 KIF2AO00139 706 aaPredicted RBP18.4■□□□□ 0.54
PTCD3-217ENST00000488801 TTI1O43156 1089 aa18.4■□□□□ 0.54
PTCD3-217ENST00000488801 CDK14O94921 469 aa18.4■□□□□ 0.54
PTCD3-217ENST00000488801 GP1BAP07359 652 aa18.4■□□□□ 0.54
PTCD3-217ENST00000488801 PRSS56P0CW18 603 aa18.4■□□□□ 0.54
PTCD3-217ENST00000488801 ACRV1P26436 265 aa18.4■□□□□ 0.54
PTCD3-217ENST00000488801 ARNTP27540 789 aa18.4■□□□□ 0.54
PTCD3-217ENST00000488801 CDKN1CP49918 316 aaPredicted RBP18.4■□□□□ 0.54
PTCD3-217ENST00000488801 CTSCP53634 463 aa18.4■□□□□ 0.54
PTCD3-217ENST00000488801 CACNG1Q06432 222 aa18.4■□□□□ 0.54
PTCD3-217ENST00000488801 XKR5Q6UX68 686 aa18.4■□□□□ 0.54
PTCD3-217ENST00000488801 LRRTM4Q86VH4 590 aa18.4■□□□□ 0.54
PTCD3-217ENST00000488801 SFTPA2Q8IWL1 248 aa18.4■□□□□ 0.54
PTCD3-217ENST00000488801 RASGEF1AQ8N9B8 481 aa18.4■□□□□ 0.54
PTCD3-217ENST00000488801 CHRAC1Q9NRG0 131 aa18.4■□□□□ 0.54
PTCD3-217ENST00000488801 SPATS2LQ9NUQ6 558 aaKnown RBP18.4■□□□□ 0.54
PTCD3-217ENST00000488801 ASIC3Q9UHC3 531 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms