RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 TTC28Q96AY4 2481 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 BCL9O00512 1426 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 NAIPQ13075 1403 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 CASKIN1Q8WXD9 1431 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 ERBINQ96RT1 1412 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 LDLRAD4O15165 306 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 PMS2P2O95744 297 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 CLEC3BP05452 202 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 PLA2G2AP14555 144 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 EDN2P20800 178 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 BDKRB2P30411 391 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 EFNA5P52803 228 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 CSTF3Q12996 717 aaKnown RBP4.32□□□□□ -1.72
ITGB1-214ENST00000488427 COASYQ13057 564 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 SYT16Q17RD7 645 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 ACCSLQ4AC99 568 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 RGMBQ6NW40 437 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 WDR73Q6P4I2 378 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 SECTM1Q8WVN6 248 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 HDAC2Q92769 488 aaKnown RBP4.32□□□□□ -1.72
ITGB1-214ENST00000488427 INTS12Q96CB8 462 aaKnown RBP4.32□□□□□ -1.72
ITGB1-214ENST00000488427 SCMH1Q96GD3 660 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 TMEM19Q96HH6 336 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 IL17FQ96PD4 163 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 EPYCQ99645 322 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 LBHD1Q9BQE6 289 aaPredicted RBP4.32□□□□□ -1.72
ITGB1-214ENST00000488427 PCGF1Q9BSM1 259 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 HAUS8Q9BT25 410 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 PPP1R3EQ9H7J1 279 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 UBTD1Q9HAC8 227 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 FBRSL1Q9HCM7 1045 aaKnown RBP4.32□□□□□ -1.72
ITGB1-214ENST00000488427 DDX4Q9NQI0 724 aaKnown RBP4.32□□□□□ -1.72
ITGB1-214ENST00000488427 SMC4Q9NTJ3 1288 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 NAALADL1Q9UQQ1 740 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 LOXL2Q9Y4K0 774 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 PCDHAC2Q9Y5I4 1007 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 KIAA0232Q92628 1395 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 IGHV4OR15-8A0A075B7B6 117 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 HNRNPCL2B2RXH8 293 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 PRR23D1E9PI22 279 aaPredicted RBP4.31□□□□□ -1.72
ITGB1-214ENST00000488427 SOCS6O14544 535 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 HS3ST1O14792 307 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 SPINT2O43291 252 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 DAB1O75553 588 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 SEC31AO94979 1220 aaKnown RBP4.31□□□□□ -1.72
ITGB1-214ENST00000488427 CLDN14O95500 239 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 DDX58O95786 925 aaKnown RBP4.31□□□□□ -1.72
ITGB1-214ENST00000488427 PRR23D2P0DMB1 279 aaPredicted RBP4.31□□□□□ -1.72
ITGB1-214ENST00000488427 UBA1P22314 1058 aaKnown RBP4.31□□□□□ -1.72
ITGB1-214ENST00000488427 SSTR2P30874 369 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 ARL3P36405 182 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 PIP4K2AP48426 406 aaPredicted RBP4.31□□□□□ -1.72
ITGB1-214ENST00000488427 HNRNPH2P55795 449 aaKnown RBP4.31□□□□□ -1.72
ITGB1-214ENST00000488427 PRAMEP78395 509 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 GRIK2Q13002 908 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 DDX10Q13206 875 aaKnown RBP4.31□□□□□ -1.72
ITGB1-214ENST00000488427 MAD2L1Q13257 205 aaPredicted RBP4.31□□□□□ -1.72
ITGB1-214ENST00000488427 EFNB3Q15768 340 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 ADIPOQQ15848 244 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 IRAK1BP1Q5VVH5 260 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 TMEM154Q6P9G4 183 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 PRSS57Q6UWY2 283 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 PQLC2Q6ZP29 291 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 ARMC9Q7Z3E5 817 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 NAGSQ8N159 534 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 RFLNBQ8N5W9 214 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 METTL27Q8N6F8 245 aaPredicted RBP4.31□□□□□ -1.72
ITGB1-214ENST00000488427 PSPC1Q8WXF1 523 aaKnown RBP4.31□□□□□ -1.72
ITGB1-214ENST00000488427 FIG4Q92562 907 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 CDCA5Q96FF9 252 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 HES6Q96HZ4 224 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 PIP5K1AQ99755 562 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 ESRP2Q9H6T0 727 aaKnown RBP4.31□□□□□ -1.72
ITGB1-214ENST00000488427 OLA1Q9NTK5 396 aaKnown RBP4.31□□□□□ -1.72
ITGB1-214ENST00000488427 INTS6Q9UL03 887 aaKnown RBP4.31□□□□□ -1.72
ITGB1-214ENST00000488427 MTMR6Q9Y217 621 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 LY75O60449 1722 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 USP54Q70EL1 1684 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 AKAP11Q9UKA4 1901 aa4.31□□□□□ -1.72
ITGB1-214ENST00000488427 NRXN1Q9ULB1 1477 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 TRPM7Q96QT4 1865 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 KIAA0100Q14667 2235 aaKnown RBP4.3□□□□□ -1.72
ITGB1-214ENST00000488427 LMO7Q8WWI1 1683 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 B4E171 279 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 F5H0A9 414 aaPredicted RBP4.3□□□□□ -1.72
ITGB1-214ENST00000488427 BUB3O43684 328 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 HNRNPCL1O60812 293 aaKnown RBP4.3□□□□□ -1.72
ITGB1-214ENST00000488427 PAGE4O60829 102 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 MBD4O95243 580 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 SCGB1D1O95968 90 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 LINC00271P0C7V0 271 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 TMEM11P17152 192 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 MAN1A1P33908 653 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 TSPAN7P41732 249 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 TMPOP42166 694 aaKnown RBP4.3□□□□□ -1.72
ITGB1-214ENST00000488427 PDE1BQ01064 536 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 ZNF155Q12901 538 aaPredicted RBP4.3□□□□□ -1.72
ITGB1-214ENST00000488427 FRG1Q14331 258 aaKnown RBP4.3□□□□□ -1.72
ITGB1-214ENST00000488427 DCST1Q5T197 706 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 TTI2Q6NXR4 508 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms