RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 BPIP17213 487 aa22.32■■□□□ 1.16
PTPN4-211ENST00000488279 TNNT3P45378 269 aaPredicted RBP22.32■■□□□ 1.16
PTPN4-211ENST00000488279 TFDP3Q5H9I0 405 aa22.32■■□□□ 1.16
PTPN4-211ENST00000488279 SPOCD1Q6ZMY3 1216 aa22.32■■□□□ 1.16
PTPN4-211ENST00000488279 ADGRG6Q86SQ4 1221 aa22.32■■□□□ 1.16
PTPN4-211ENST00000488279 FAM129CQ86XR2 697 aa22.32■■□□□ 1.16
PTPN4-211ENST00000488279 RCOR2Q8IZ40 523 aa22.32■■□□□ 1.16
PTPN4-211ENST00000488279 NCSTNQ92542 709 aa22.32■■□□□ 1.16
PTPN4-211ENST00000488279 ART4Q93070 314 aa22.32■■□□□ 1.16
PTPN4-211ENST00000488279 DDA1Q9BW61 102 aa22.32■■□□□ 1.16
PTPN4-211ENST00000488279 PRDM8Q9NQV8 689 aa22.32■■□□□ 1.16
PTPN4-211ENST00000488279 CPNE7Q9UBL6 633 aa22.32■■□□□ 1.16
PTPN4-211ENST00000488279 FAM153AQ9UHL3 310 aa22.32■■□□□ 1.16
PTPN4-211ENST00000488279 ADGRG1Q9Y653 693 aa22.32■■□□□ 1.16
PTPN4-211ENST00000488279 HELZ2Q9BYK8 2649 aaKnown RBP22.32■■□□□ 1.16
PTPN4-211ENST00000488279 SCN8AQ9UQD0 1980 aa22.32■■□□□ 1.16
PTPN4-211ENST00000488279 PIEZO2Q9H5I5 2752 aa22.31■■□□□ 1.16
PTPN4-211ENST00000488279 EFCAB7A8K855 629 aa22.31■■□□□ 1.16
PTPN4-211ENST00000488279 B4E171 279 aa22.31■■□□□ 1.16
PTPN4-211ENST00000488279 ITGB2P05107 769 aa22.31■■□□□ 1.16
PTPN4-211ENST00000488279 PLA2G2AP14555 144 aa22.31■■□□□ 1.16
PTPN4-211ENST00000488279 PECAM1P16284 738 aaPredicted RBP22.31■■□□□ 1.16
PTPN4-211ENST00000488279 TSPAN7P41732 249 aa22.31■■□□□ 1.16
PTPN4-211ENST00000488279 EPHA4P54764 986 aa22.31■■□□□ 1.16
PTPN4-211ENST00000488279 WASHC5Q12768 1159 aa22.31■■□□□ 1.16
PTPN4-211ENST00000488279 SNAP47Q5SQN1 464 aa22.31■■□□□ 1.16
PTPN4-211ENST00000488279 DCAF12Q5T6F0 453 aa22.31■■□□□ 1.16
PTPN4-211ENST00000488279 JPH3Q8WXH2 748 aaPredicted RBP22.31■■□□□ 1.16
PTPN4-211ENST00000488279 TRIM5Q9C035 493 aa22.31■■□□□ 1.16
PTPN4-211ENST00000488279 OSGEPL1Q9H4B0 414 aa22.31■■□□□ 1.16
PTPN4-211ENST00000488279 OCIAD1Q9NX40 245 aa22.31■■□□□ 1.16
PTPN4-211ENST00000488279 B3GALT1Q9Y5Z6 326 aa22.31■■□□□ 1.16
PTPN4-211ENST00000488279 LOC285095A0A1B0GVY8 99 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 A8MU76 341 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 AURKAO14965 403 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 CHUKO15111 745 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 KMOO15229 486 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 VEGFDO43915 354 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 EPOP01588 193 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 CD68P34810 354 aaPredicted RBP22.3■■□□□ 1.16
PTPN4-211ENST00000488279 MAPK9P45984 424 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 ATP1A2P50993 1020 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 ARSDP51689 593 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 WNT3AP56704 352 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 RAB15P59190 212 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 SPA17Q15506 151 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 SARM1Q6SZW1 724 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 CRTC3Q6UUV7 619 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 XKR5Q6UX68 686 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 ZC3H18Q86VM9 953 aaKnown RBP22.3■■□□□ 1.16
PTPN4-211ENST00000488279 KATNAL2Q8IYT4 538 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 TC2NQ8N9U0 490 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 PMEPA1Q969W9 287 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 PLEKHG4BQ96PX9 1271 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 EPB41L1Q9H4G0 881 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 TRABDQ9H4I3 376 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 BPIFA1Q9NP55 256 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 KLHL8Q9P2G9 620 aaPredicted RBP22.3■■□□□ 1.16
PTPN4-211ENST00000488279 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.3■■□□□ 1.16
PTPN4-211ENST00000488279 PCDHGA4Q9Y5G9 962 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 PCDHA13Q9Y5I0 950 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 SPO11Q9Y5K1 396 aa22.3■■□□□ 1.16
PTPN4-211ENST00000488279 BOD1L1Q8NFC6 3051 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 CDK14O94921 469 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 LCA5LO95447 670 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 HMGCLP35914 325 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 ADCY2Q08462 1091 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 INSCQ1MX18 579 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 PID1Q7Z2X4 250 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 ARHGAP22Q7Z5H3 698 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 LRRTM4Q86VH4 590 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 CCDC50Q8IVM0 306 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 CCDC170Q8IYT3 715 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 NKD1Q969G9 470 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 VAT1Q99536 393 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 ARHGAP9Q9BRR9 750 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 GOLPH3Q9H4A6 298 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 LUC7LQ9NQ29 371 aaKnown RBP22.29■■□□□ 1.16
PTPN4-211ENST00000488279 SLC23A2Q9UGH3 650 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 ZNF462Q96JM2 2506 aa22.29■■□□□ 1.16
PTPN4-211ENST00000488279 hCG_1818297A0A087WSY0 165 aa22.28■■□□□ 1.16
PTPN4-211ENST00000488279 B8ZZF3 427 aa22.28■■□□□ 1.16
PTPN4-211ENST00000488279 MTX2O75431 263 aa22.28■■□□□ 1.16
PTPN4-211ENST00000488279 ZNF7P17097 686 aaPredicted RBP22.28■■□□□ 1.16
PTPN4-211ENST00000488279 XRCC1P18887 633 aaPredicted RBP22.28■■□□□ 1.16
PTPN4-211ENST00000488279 NFKB1P19838 968 aa22.28■■□□□ 1.16
PTPN4-211ENST00000488279 ZDHHC20Q5W0Z9 365 aa22.28■■□□□ 1.16
PTPN4-211ENST00000488279 KDELC1Q6UW63 502 aa22.28■■□□□ 1.16
PTPN4-211ENST00000488279 IL22RA1Q8N6P7 574 aa22.28■■□□□ 1.16
PTPN4-211ENST00000488279 BMPERQ8N8U9 685 aa22.28■■□□□ 1.16
PTPN4-211ENST00000488279 TEFMQ96QE5 360 aaKnown RBP22.28■■□□□ 1.16
PTPN4-211ENST00000488279 VPS35Q96QK1 796 aa22.28■■□□□ 1.16
PTPN4-211ENST00000488279 FCRL5Q96RD9 977 aa22.28■■□□□ 1.16
PTPN4-211ENST00000488279 TBC1D10AQ9BXI6 508 aa22.28■■□□□ 1.16
PTPN4-211ENST00000488279 UCK1Q9HA47 277 aa22.28■■□□□ 1.16
PTPN4-211ENST00000488279 DNAJC16Q9Y2G8 782 aa22.28■■□□□ 1.16
PTPN4-211ENST00000488279 HACD1B0YJ81 288 aa22.27■■□□□ 1.16
PTPN4-211ENST00000488279 VIPP01282 170 aa22.27■■□□□ 1.16
PTPN4-211ENST00000488279 WT1P19544 449 aaPredicted RBP22.27■■□□□ 1.16
PTPN4-211ENST00000488279 UGT1A3P35503 534 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms