RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 PPP6R3Q5H9R7 873 aaPredicted RBP4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 DUS1LQ6P1R4 473 aaKnown RBP4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 DENND5BQ6ZUT9 1274 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 BEST3Q8N1M1 668 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 HM13Q8TCT9 377 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 NSMCE1Q8WV22 266 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 OIT3Q8WWZ8 545 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 ORAI1Q96D31 301 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 TXNDC15Q96J42 360 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 RADILQ96JH8 1075 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 RBM38Q9H0Z9 239 aaKnown RBP4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 EBF3Q9H4W6 596 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 WDR26Q9H7D7 661 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 SLC35C2Q9NQQ7 365 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 MARCH4Q9P2E8 410 aaPredicted RBP4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 GIMAP2Q9UG22 337 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 TINAGQ9UJW2 476 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 ACSL5Q9ULC5 683 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 ZNF711Q9Y462 761 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 PZPP20742 1482 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 CEP152O94986 1710 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 TNRQ92752 1358 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 CPED1A4D0V7 1026 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 H3BNX3 289 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 UBE2CO00762 179 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 SMAD9O15198 467 aaKnown RBP4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 NDUFS7O75251 213 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 CH25HO95992 272 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 LMO1P25800 156 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 BDKRB2P30411 391 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 HOXD3P31249 432 aaPredicted RBP4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 AMTP48728 403 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 PPP5CP53041 499 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 CSNK2A1P68400 391 aaPredicted RBP4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 UBXN2AP68543 259 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 GRAPQ13588 217 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 BAATQ14032 418 aaPredicted RBP4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 CCDC96Q2M329 555 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 PAPPA-AS1Q5QFB9 102 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 KRT79Q5XKE5 535 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 NSUN5P2Q63ZY6 315 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 ADALQ6DHV7 355 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 EPHX4Q8IUS5 362 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 MCEMP1Q8IX19 187 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 MINDY1Q8N5J2 469 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 CSNK2A3Q8NEV1 391 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 OR1J2Q8NGS2 313 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 RHBDF1Q96CC6 855 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 TMCO6Q96DC7 493 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 CEP295NLQ96MC4 621 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 ZNF778Q96MU6 729 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 AP1M1Q9BXS5 423 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 SLC29A3Q9BZD2 475 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 SIL1Q9H173 461 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 MAGIXQ9H6Y5 334 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 C17orf75Q9HAS0 396 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 PSD3Q9NYI0 1048 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 TAB2Q9NYJ8 693 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 UBA2Q9UBT2 640 aaPredicted RBP4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 CFDP1Q9UEE9 299 aaPredicted RBP4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 STK39Q9UEW8 545 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 SQORQ9Y6N5 450 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 SPAG9O60271 1321 aaKnown RBP4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 ZNF521Q96K83 1311 aa4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 ATXN2Q99700 1313 aaKnown RBP4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 ZNF644Q9H582 1327 aaPredicted RBP4.95□□□□□ -1.62
PRPF38A-203ENST00000487160 CCDC18Q5T9S5 1454 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 FAM135AQ9P2D6 1515 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 LOC100509620A0A075B734 347 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 LOC102723996A0A087X1L8 192 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 KANSL1LA0AUZ9 987 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 hDV102S1A0JD36 115 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 SOCS6O14544 535 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 PLPP2O43688 288 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 C21orf33P30042 268 aaPredicted RBP4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 HNRNPH2P55795 449 aaKnown RBP4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 PPP2R2BQ00005 443 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 FOXM1Q08050 763 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 SPOCK1Q08629 439 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 TWIST1Q15672 202 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 CCDC142Q17RM4 750 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 DCST1Q5T197 706 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 ARMC3Q5W041 872 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 KCTD18Q6PI47 426 aaPredicted RBP4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 CCDC190Q86UF4 302 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 PRR26Q8N8Z3 221 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 POMGNT2Q8NAT1 580 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 POGLUT1Q8NBL1 392 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 HMGCLL1Q8TB92 370 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 ASB5Q8WWX0 329 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 ADAMTS14Q8WXS8 1223 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 CNDP2Q96KP4 475 aaKnown RBP4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 CDRT15Q96T59 188 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 BAG1Q99933 345 aaPredicted RBP4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 MMTAG2Q9BU76 263 aaKnown RBP4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 DCLK3Q9C098 648 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 DNAJC18Q9H819 358 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 CCDC177Q9NQR7 707 aaPredicted RBP4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 HIF1ANQ9NWT6 349 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 DNAJB4Q9UDY4 337 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms