RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	LY6G6E	A0A0G2JKS1	128 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	C1orf232	A0A0U1RR37	186 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	CCDC78	A2IDD5	438 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	AURKA	O14965	403 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	CASC3	O15234	703 aa	Known RBP	12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	BUD23	O43709	281 aa	Known RBP	12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	TM7SF2	O76062	418 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	CLDN7	O95471	211 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	CRTAM	O95727	393 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	MYBL2	P10244	700 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	C6	P13671	934 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	TNFRSF8	P28908	595 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	ECHS1	P30084	290 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	CXADR	P78310	365 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	MSLN	Q13421	630 aa	Predicted RBP	12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	AGER	Q15109	404 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	IRF4	Q15306	451 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	TBC1D25	Q3MII6	688 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	PCID2	Q5JVF3	399 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	WDR93	Q6P2C0	686 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	ANKMY2	Q8IV38	441 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	OR4C6	Q8NH72	309 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	BRSK1	Q8TDC3	778 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	BTN2A2	Q8WVV5	523 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	SIGLEC10	Q96LC7	697 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	DUSP23	Q9BVJ7	150 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	TRABD	Q9H4I3	376 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	ZFYVE1	Q9HBF4	777 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	CHMP2B	Q9UQN3	213 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	ARL5A	Q9Y689	179 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991		U3KQA8	63 aa		12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	ASH1L	Q9NR48	2969 aa	Known RBP	12.99	□□□□□ -0.33
NR1H3-223	ENST00000486991	HEATR9	A2RTY3	570 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	C2orf81	A6NN90	581 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	EIF3H	O15372	352 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	OPA1	O60313	960 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	PIAS2	O75928	621 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	ELFN1	P0C7U0	828 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	NME1	P15531	152 aa	Known RBP	12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	LHCGR	P22888	699 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	ADRA1D	P25100	572 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	ELK3	P41970	407 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	LIG3	P49916	1009 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	DUSP3	P51452	185 aa	Predicted RBP	12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	THOP1	P52888	689 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	YPEL5	P62699	121 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	E2F1	Q01094	437 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	EIF2B5	Q13144	721 aa	Known RBP	12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	FASTKD3	Q14CZ7	662 aa	Known RBP	12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	TAF1A	Q15573	450 aa	Predicted RBP	12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	CNGA3	Q16281	694 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	WSCD2	Q2TBF2	565 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	LRRC66	Q68CR7	880 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	CEP128	Q6ZU80	1094 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	GPR155	Q7Z3F1	870 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	PARG	Q86W56	976 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	ZBED8	Q8IZ13	594 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	AGGF1	Q8N302	714 aa	eCLIP	12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	ZNF843	Q8N446	348 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	TTC30B	Q8N4P2	665 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	EIF1AD	Q8N9N8	165 aa	Known RBP	12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	FUBP1	Q96AE4	644 aa	Known RBP	12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	STAMBPL1	Q96FJ0	436 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	APOLD1	Q96LR9	279 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	RANBP9	Q96S59	729 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	LYSMD1	Q96S90	227 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	TSPYL1	Q9H0U9	437 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	CPNE5	Q9HCH3	593 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	CHRAC1	Q9NRG0	131 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	DNAJC28	Q9NX36	388 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	TCAF1	Q9Y4C2	921 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	KCTD3	Q9Y597	815 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	CSNK1G3	Q9Y6M4	447 aa		12.98	□□□□□ -0.33
NR1H3-223	ENST00000486991	UNC13C	Q8NB66	2214 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991		E7ESA3	106 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	STX7	O15400	261 aa	Known RBP	12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	CTIF	O43310	598 aa	Known RBP	12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	TUBB	P07437	444 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	FAM153B	P0C7A2	387 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	CKMT1A	P12532	417 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	ZNF30	P17039	623 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	LPO	P22079	712 aa	Predicted RBP	12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	TMPRSS15	P98073	1019 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	LAMB3	Q13751	1172 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	PDE1C	Q14123	709 aa	Predicted RBP	12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	PTPRCAP	Q14761	206 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	ACOX1	Q15067	660 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	CDKN3	Q16667	212 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	FAM153C	Q494X1	144 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	CDCP2	Q5VXM1	449 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	KCTD16	Q68DU8	428 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	CES3	Q6UWW8	571 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	LIPI	Q6XZB0	460 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	IGDCC3	Q8IVU1	814 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	PELI3	Q8N2H9	469 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	FBXO36	Q8NEA4	188 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	ZNF548	Q8NEK5	533 aa	Predicted RBP	12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	PYROXD1	Q8WU10	500 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	LRRC39	Q96DD0	335 aa		12.97	□□□□□ -0.33
NR1H3-223	ENST00000486991	CFAP36	Q96G28	342 aa		12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms