RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 ENPP2Q13822 863 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 PTPRRQ15256 657 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 TTLL9Q3SXZ7 439 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 ZNF678Q5SXM1 525 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 C9orf64Q5T6V5 341 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 SEL1L3Q68CR1 1132 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 PTRHD1Q6GMV3 140 aaKnown RBP11.52□□□□□ -0.57
PRKCB-207ENST00000486868 ATG14Q6ZNE5 492 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 FRMD7Q6ZUT3 714 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 ZNF765Q7L2R6 523 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 TECPR1Q7Z6L1 1165 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 ADAMTSL2Q86TH1 951 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 SPATA6LQ8N4H0 392 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 ZNF781Q8N8C0 355 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 SORCS1Q8WY21 1168 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 RAB7BQ96AH8 199 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 NSL1Q96IY1 281 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 VPS35Q96QK1 796 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 COPS8Q99627 209 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 ZSCAN5AQ9BUG6 496 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 ERVK-6Q9BXR3 956 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 LRMDAQ9H2I8 198 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 RASSF4Q9H2L5 321 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 FAM83DQ9H4H8 585 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 PCDH12Q9NPG4 1184 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 ARHGEF3Q9NR81 526 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 SPATS2LQ9NUQ6 558 aaKnown RBP11.52□□□□□ -0.57
PRKCB-207ENST00000486868 FAM50BQ9Y247 325 aa11.52□□□□□ -0.57
PRKCB-207ENST00000486868 GBF1Q92538 1859 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 OTOL1A6NHN0 477 aaPredicted RBP11.51□□□□□ -0.57
PRKCB-207ENST00000486868 CCDC85CA6NKD9 419 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 CAPN14A8MX76 684 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 CFAP99D6REC4 459 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 C1QTNF3-AMACRE9PGA6 284 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 RFXAPO00287 272 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 LINC01565O15544 149 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 NIPSNAP2O75323 286 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 OR56A5P0C7T3 313 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 T-ENOLP0DO92 83 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 KITP10721 976 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 AOC1P19801 751 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 KCNA5P22460 613 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 PTPN4P29074 926 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 PRDX6P30041 224 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 MMP12P39900 470 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 TNFRSF4P43489 277 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 PGGT1BP53609 377 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 ALDH18A1P54886 795 aaKnown RBP11.51□□□□□ -0.57
PRKCB-207ENST00000486868 INHBCP55103 352 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 IRX1P78414 480 aaPredicted RBP11.51□□□□□ -0.57
PRKCB-207ENST00000486868 RALGDSQ12967 914 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 CDC16Q13042 620 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 ZNF234Q14588 700 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 OR4D1Q15615 310 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 ITPRIPL2Q3MIP1 535 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 TMEM52BQ4KMG9 183 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 FNDC3BQ53EP0 1204 aaKnown RBP11.51□□□□□ -0.57
PRKCB-207ENST00000486868 GPRC6AQ5T6X5 926 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 MAVSQ7Z434 540 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 TTC7BQ86TV6 843 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 PNPLA1Q8N8W4 532 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 KCNV2Q8TDN2 545 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 NXPE3Q969Y0 559 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 FUBP1Q96AE4 644 aaKnown RBP11.51□□□□□ -0.57
PRKCB-207ENST00000486868 KLHL29Q96CT2 875 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 MAELQ96JY0 434 aaKnown RBP11.51□□□□□ -0.57
PRKCB-207ENST00000486868 MSLNLQ96KJ4 702 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 RILPQ96NA2 401 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 TRMT61BQ9BVS5 477 aaKnown RBP11.51□□□□□ -0.57
PRKCB-207ENST00000486868 HDAC8Q9BY41 377 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 GSTO2Q9H4Y5 243 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 COG4Q9H9E3 785 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 TRPV5Q9NQA5 729 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 NUDT4Q9NZJ9 180 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 MARCOQ9UEW3 520 aaPredicted RBP11.51□□□□□ -0.57
PRKCB-207ENST00000486868 ZDHHC2Q9UIJ5 367 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 TRIM33Q9UPN9 1127 aa11.51□□□□□ -0.57
PRKCB-207ENST00000486868 TNPO3Q9Y5L0 923 aaKnown RBP11.51□□□□□ -0.57
PRKCB-207ENST00000486868 KIF26AQ9ULI4 1882 aaPredicted RBP11.51□□□□□ -0.57
PRKCB-207ENST00000486868 GOLGA8QA0A0J9YX86 632 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 GOLGA8OA6NCC3 632 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 TBC1D3BA6NDS4 549 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 GOLGA8NF8WBI6 632 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 ARNTLO00327 626 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 AREL1O15033 823 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 GRID2O43424 1007 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 KAT7O95251 611 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 APODP05090 189 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 CHRNGP07510 517 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 UGT1A6P19224 532 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 UGT1A1P22309 533 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 UGT1A4P22310 534 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 UGT1A3P35503 534 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 UGT1A5P35504 534 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 LIG3P49916 1009 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 MNAT1P51948 309 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 GBX1Q14549 363 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 ATP13A5Q4VNC0 1218 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 UNC50Q53HI1 259 aa11.5□□□□□ -0.57
PRKCB-207ENST00000486868 LDLRAP1Q5SW96 308 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms