RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 PNLIPP16233 465 aa13□□□□□ -0.33
SF1-216ENST00000486867 UGT1A6P19224 532 aa13□□□□□ -0.33
SF1-216ENST00000486867 UGT1A1P22309 533 aa13□□□□□ -0.33
SF1-216ENST00000486867 UGT1A4P22310 534 aa13□□□□□ -0.33
SF1-216ENST00000486867 AK4P27144 223 aaPredicted RBP13□□□□□ -0.33
SF1-216ENST00000486867 UGT1A3P35503 534 aa13□□□□□ -0.33
SF1-216ENST00000486867 UGT1A5P35504 534 aa13□□□□□ -0.33
SF1-216ENST00000486867 BASP1P80723 227 aaKnown RBP13□□□□□ -0.33
SF1-216ENST00000486867 DAB2P98082 770 aa13□□□□□ -0.33
SF1-216ENST00000486867 TMEM115Q12893 351 aaPredicted RBP13□□□□□ -0.33
SF1-216ENST00000486867 HLTFQ14527 1009 aaKnown RBP eCLIP13□□□□□ -0.33
SF1-216ENST00000486867 NR1D2Q14995 579 aa13□□□□□ -0.33
SF1-216ENST00000486867 CDCP2Q5VXM1 449 aa13□□□□□ -0.33
SF1-216ENST00000486867 GUSBP11Q6P575 273 aa13□□□□□ -0.33
SF1-216ENST00000486867 LRRC8BQ6P9F7 803 aa13□□□□□ -0.33
SF1-216ENST00000486867 PPP1R21Q6ZMI0 780 aa13□□□□□ -0.33
SF1-216ENST00000486867 NLRP9Q7RTR0 991 aa13□□□□□ -0.33
SF1-216ENST00000486867 ZNF438Q7Z4V0 828 aa13□□□□□ -0.33
SF1-216ENST00000486867 SNX20Q7Z614 316 aa13□□□□□ -0.33
SF1-216ENST00000486867 C17orf53Q8N3J3 647 aaPredicted RBP13□□□□□ -0.33
SF1-216ENST00000486867 PNPLA1Q8N8W4 532 aa13□□□□□ -0.33
SF1-216ENST00000486867 MCUQ8NE86 351 aa13□□□□□ -0.33
SF1-216ENST00000486867 FAM46DQ8NEK8 389 aa13□□□□□ -0.33
SF1-216ENST00000486867 OR13J1Q8NGT2 312 aa13□□□□□ -0.33
SF1-216ENST00000486867 CPT1BQ92523 772 aa13□□□□□ -0.33
SF1-216ENST00000486867 ULK4Q96C45 1275 aa13□□□□□ -0.33
SF1-216ENST00000486867 CDKN2AIPNLQ96HQ2 116 aa13□□□□□ -0.33
SF1-216ENST00000486867 ZCCHC2Q9C0B9 1178 aaKnown RBP13□□□□□ -0.33
SF1-216ENST00000486867 UGT1A7Q9HAW7 530 aa13□□□□□ -0.33
SF1-216ENST00000486867 UGT1A10Q9HAW8 530 aa13□□□□□ -0.33
SF1-216ENST00000486867 UGT1A8Q9HAW9 530 aa13□□□□□ -0.33
SF1-216ENST00000486867 MOSPD1Q9UJG1 213 aa13□□□□□ -0.33
SF1-216ENST00000486867 PADI4Q9UM07 663 aa13□□□□□ -0.33
SF1-216ENST00000486867 DOLKQ9UPQ8 538 aa13□□□□□ -0.33
SF1-216ENST00000486867 TCAF1Q9Y4C2 921 aa13□□□□□ -0.33
SF1-216ENST00000486867 DNMT3AQ9Y6K1 912 aaPredicted RBP13□□□□□ -0.33
SF1-216ENST00000486867 MAP1BP46821 2468 aaKnown RBP12.99□□□□□ -0.33
SF1-216ENST00000486867 TCRBV7S3A2A0A539 114 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 CCDC188H7C350 402 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 SGTAO43765 313 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 NUDT21O43809 227 aaKnown RBP12.99□□□□□ -0.33
SF1-216ENST00000486867 HYAL3O43820 417 aaPredicted RBP12.99□□□□□ -0.33
SF1-216ENST00000486867 OPA1O60313 960 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 KCNJ13O60928 360 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 CDK14O94921 469 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 TOP3BO95985 862 aaKnown RBP12.99□□□□□ -0.33
SF1-216ENST00000486867 MLNP12872 115 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 KCNA4P22459 653 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 IVDP26440 423 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 PTGIRP43119 386 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 MAGEA3P43357 314 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 NPY2RP49146 381 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 LMAN1P49257 510 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 ARSDP51689 593 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 B4GALNT1Q00973 533 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 DMPKQ09013 629 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 FOXC1Q12948 553 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 GPS1Q13098 491 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 PTK6Q13882 451 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 SKIDA1Q1XH10 827 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 C14orf28Q4W4Y0 310 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 ZNF648Q5T619 568 aaPredicted RBP12.99□□□□□ -0.33
SF1-216ENST00000486867 TSTD2Q5T7W7 516 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 WASH2PQ6VEQ5 465 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 MARK2Q7KZI7 788 aaKnown RBP12.99□□□□□ -0.33
SF1-216ENST00000486867 LRRTM4Q86VH4 590 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 TMPRSS12Q86WS5 348 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 NAGSQ8N159 534 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 NXPE1Q8N323 547 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 GALNT15Q8N3T1 639 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 CHCHD4Q8N4Q1 142 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 RASGEF1AQ8N9B8 481 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 DNAAF3Q8N9W5 541 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 IFI44Q8TCB0 444 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 ZNF514Q96K75 400 aaPredicted RBP12.99□□□□□ -0.33
SF1-216ENST00000486867 RUNDC3BQ96NL0 473 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 SCNM1Q9BWG6 230 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 IL22Q9GZX6 179 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 ASB8Q9H765 288 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 MRM3Q9HC36 420 aaKnown RBP12.99□□□□□ -0.33
SF1-216ENST00000486867 ARFGAP3Q9NP61 516 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 WASH6PQ9NQA3 447 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 TREX1Q9NSU2 369 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 PIH1D1Q9NWS0 290 aaKnown RBP12.99□□□□□ -0.33
SF1-216ENST00000486867 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.99□□□□□ -0.33
SF1-216ENST00000486867 ZNHIT2Q9UHR6 403 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 ANGPTL2Q9UKU9 493 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 PLEKHM1Q9Y4G2 1056 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 GPSM3Q9Y4H4 160 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 IGF2RP11717 2491 aa12.99□□□□□ -0.33
SF1-216ENST00000486867 ACACAQ13085 2346 aa12.98□□□□□ -0.33
SF1-216ENST00000486867 KLHL33A6NCF5 533 aa12.98□□□□□ -0.33
SF1-216ENST00000486867 NTN3O00634 580 aaPredicted RBP12.98□□□□□ -0.33
SF1-216ENST00000486867 MTX2O75431 263 aa12.98□□□□□ -0.33
SF1-216ENST00000486867 TMEM63AO94886 807 aa12.98□□□□□ -0.33
SF1-216ENST00000486867 ECEL1O95672 775 aa12.98□□□□□ -0.33
SF1-216ENST00000486867 MYF5P13349 255 aa12.98□□□□□ -0.33
SF1-216ENST00000486867 GLB1P16278 677 aa12.98□□□□□ -0.33
SF1-216ENST00000486867 ZNF7P17097 686 aaPredicted RBP12.98□□□□□ -0.33
SF1-216ENST00000486867 ITGALP20701 1170 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms