RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 DENND6AQ8IWF6 608 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 GPR150Q8NGU9 434 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 BTN2A2Q8WVV5 523 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 HNRNPLLQ8WVV9 542 aaKnown RBP12.67□□□□□ -0.38
HDAC6-229ENST00000486665 UBLCP1Q8WVY7 318 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-229ENST00000486665 CCDC97Q96F63 343 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-229ENST00000486665 SERAC1Q96JX3 654 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 SLC6A18Q96N87 628 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 ZSCAN5AQ9BUG6 496 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 TMEM121BQ9BXQ6 578 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-229ENST00000486665 FUT8Q9BYC5 575 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 EIF2B4Q9UI10 523 aaKnown RBP12.67□□□□□ -0.38
HDAC6-229ENST00000486665 DMTF1Q9Y222 760 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 HS3ST3A1Q9Y663 406 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 PI4KAP42356 2102 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 FAM208BQ5VWN6 2430 aa12.67□□□□□ -0.38
HDAC6-229ENST00000486665 CACNA1EQ15878 2313 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 TRPM6Q9BX84 2022 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 MEI4A8MW99 385 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 H0Y8X5 98 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 FPGTO14772 594 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 ERLIN1O75477 346 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 SPAG6O75602 509 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 SHBGP04278 402 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 PROS1P07225 676 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 ABHD2P08910 425 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 ITGALP20701 1170 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 GABRB3P28472 473 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 PHBP35232 272 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 TRIM23P36406 574 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 NUDT1P36639 197 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 IRX4P78413 519 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 MPP1Q00013 466 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 FOXC1Q12948 553 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 ITGA9Q13797 1035 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 DBN1Q16643 649 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 KBTBD12Q3ZCT8 623 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 GPR33Q49SQ1 333 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 KHDC1Q4VXA5 237 aaKnown RBP12.66□□□□□ -0.38
HDAC6-229ENST00000486665 ZNF789Q5FWF6 425 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 TRIM74Q86UV6 250 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 C11orf74Q86VG3 221 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 MREGQ8N565 214 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 TMEM145Q8NBT3 493 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 DENND6BQ8NEG7 585 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 C1orf216Q8TAB5 229 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 DNASE2BQ8WZ79 361 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 FOXJ1Q92949 421 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 GLYATL1Q969I3 302 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 COX14Q96I36 57 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 APOOQ9BUR5 198 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 LGR4Q9BXB1 951 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 TEX101Q9BY14 249 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 TMEM74BQ9NUR3 256 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 CRLS1Q9UJA2 301 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 OR1A2Q9Y585 309 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 OAS3Q9Y6K5 1087 aaKnown RBP12.66□□□□□ -0.38
HDAC6-229ENST00000486665 DOCK9Q9BZ29 2069 aa12.66□□□□□ -0.38
HDAC6-229ENST00000486665 PKD1L2Q7Z442 2459 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 A0A087WUV0 522 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-229ENST00000486665 OR1I1O60431 355 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 MTX2O75431 263 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 S1PR4O95977 384 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 ITPKAP23677 461 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 ACRV1P26436 265 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 TEAD1P28347 426 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 STX2P32856 288 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 SLC1A2P43004 574 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 DHPSP49366 369 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-229ENST00000486665 PFN3P60673 137 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 PDE1CQ14123 709 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-229ENST00000486665 STAT4Q14765 748 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 SPDYCQ5MJ68 293 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 TPRG1LQ5T0D9 272 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 GPRC6AQ5T6X5 926 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 ZNF470Q6ECI4 717 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 MRNIPQ6NTE8 343 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 FBXO38Q6PIJ6 1188 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 ABI3BPQ7Z7G0 1075 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 HEATR4Q86WZ0 1026 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 CILP2Q8IUL8 1156 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 CNTN4Q8IWV2 1026 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 RGL4Q8IZJ4 473 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 NXPE1Q8N323 547 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 OTUD6BQ8N6M0 293 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 PPM1NQ8N819 430 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 C2CD4AQ8NCU7 369 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-229ENST00000486665 NAT14Q8WUY8 206 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 PIGKQ92643 395 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 HIC2Q96JB3 615 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 VPS35Q96QK1 796 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 BOCQ9BWV1 1114 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 MIR1-1HGQ9H1L0 117 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 ACSS3Q9H6R3 686 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 TMEM9BQ9NQ34 198 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 FSCN3Q9NQT6 498 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 FBXO6Q9NRD1 293 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-229ENST00000486665 SMOXQ9NWM0 555 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 FBXO5Q9UKT4 447 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 TMEM98Q9Y2Y6 226 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms