RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 UBFD1O14562 309 aaKnown RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 SUPT3HO75486 399 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 JUNP05412 331 aaKnown RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 IRS1P35568 1242 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 NNMTP40261 264 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 NSG1P42857 185 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 CTSOP43234 321 aaPredicted RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 RECQLP46063 649 aaPredicted RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 CPA2P48052 419 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 STK19P49842 368 aaPredicted RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 MXRA7P84157 204 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 GRIK2Q13002 908 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 CYLC2Q14093 348 aaPredicted RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 PTK2BQ14289 1009 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 PCBP2Q15366 365 aaKnown RBP eCLIP11.84□□□□□ -0.51
PKP4-213ENST00000486254 PFKFB4Q16877 469 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 OGFOD2Q6N063 350 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 CRTC1Q6UUV9 634 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 CYHR1Q6ZMK1 362 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 DPY19L3Q6ZPD9 716 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 RNF165Q6ZSG1 346 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 GPSM1Q86YR5 675 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 PDPRQ8NCN5 879 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 OR6K2Q8NGY2 324 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 FBXO27Q8NI29 283 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 AGR3Q8TD06 166 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 FRS2Q8WU20 508 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 C19orf60Q96EN9 201 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 LINGO1Q96FE5 620 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 LENG8Q96PV6 779 aaPredicted RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 PANX3Q96QZ0 392 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 ZNF382Q96SR6 550 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 TNKS2Q9H2K2 1166 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 ZDHHC3Q9NYG2 299 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 SLC7A8Q9UHI5 535 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 ERVW-1Q9UQF0 538 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 MTF2Q9Y483 593 aaPredicted RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 HCFC2Q9Y5Z7 792 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 COPG1Q9Y678 874 aaKnown RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 BPTFQ12830 3046 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 PLXNA2O75051 1894 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 MYO7AQ13402 2215 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 TMEM233B4DJY2 109 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 AZIN1O14977 448 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 CLDN7O95471 211 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 ADH1CP00326 375 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 CYP2A6P11509 494 aaPredicted RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 ENO3P13929 434 aaPredicted RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 CEBPBP17676 345 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 GNAZP19086 355 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 POLR2EP19388 210 aaKnown RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 EN2P19622 333 aaPredicted RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 CHRM3P20309 590 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 ITGAXP20702 1163 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 DGKAP23743 735 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 PKNOX1P55347 436 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 C1QTNF8P60827 252 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 SH3BP2P78314 561 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 CLCQ05315 142 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 TTLL9Q3SXZ7 439 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 CMPK2Q5EBM0 449 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 ACSBG2Q5FVE4 666 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 LRRC66Q68CR7 880 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 PTRHD1Q6GMV3 140 aaKnown RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 AAGABQ6PD74 315 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 FAM151BQ6UXP7 276 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 GDPD4Q6W3E5 623 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 LARP4Q71RC2 724 aaKnown RBP eCLIP11.84□□□□□ -0.51
PKP4-213ENST00000486254 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.84□□□□□ -0.51
PKP4-213ENST00000486254 C7orf61Q8IZ16 206 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 RYBPQ8N488 228 aaPredicted RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 KYQ8NBH2 561 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 SIDT2Q8NBJ9 832 aaKnown RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 OR2A12Q8NGT7 310 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 UBTD2Q8WUN7 234 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 OSCP1Q8WVF1 389 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 RPL10LQ96L21 214 aaKnown RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 MRGPRX3Q96LB0 322 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 FAM161BQ96MY7 647 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 SERPINI1Q99574 410 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 SLC30A3Q99726 388 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 HEPHQ9BQS7 1158 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 BRD9Q9H8M2 597 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 RDH14Q9HBH5 336 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 STX18Q9P2W9 335 aaKnown RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 STOML1Q9UBI4 398 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 CRLS1Q9UJA2 301 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 PCTPQ9UKL6 214 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 MRPS23Q9Y3D9 190 aaKnown RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 ATG2AQ2TAZ0 1938 aa11.83□□□□□ -0.52
PKP4-213ENST00000486254 NPEPPSL1A6NEC2 478 aa11.83□□□□□ -0.52
PKP4-213ENST00000486254 CDC7O00311 574 aa11.83□□□□□ -0.52
PKP4-213ENST00000486254 NEMP1O14524 444 aa11.83□□□□□ -0.52
PKP4-213ENST00000486254 UBDO15205 165 aa11.83□□□□□ -0.52
PKP4-213ENST00000486254 FKBP6O75344 327 aa11.83□□□□□ -0.52
PKP4-213ENST00000486254 ENTPD5O75356 428 aa11.83□□□□□ -0.52
PKP4-213ENST00000486254 ESRRBO95718 433 aa11.83□□□□□ -0.52
PKP4-213ENST00000486254 EEF1DP29692 281 aaKnown RBP11.83□□□□□ -0.52
PKP4-213ENST00000486254 PSMD8P48556 350 aa11.83□□□□□ -0.52
PKP4-213ENST00000486254 MTTPP55157 894 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms