RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 RFC2P35250 354 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 PSMC2P35998 433 aaKnown RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 SREBF1P36956 1147 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 FNTAP49354 379 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 CARSP49589 748 aaKnown RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 CLCN4P51793 760 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 PMS2P54278 862 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 CASP9P55211 416 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 RAC3P60763 192 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 GNGT1P63211 74 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 TUBA4AP68366 448 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 PRAMEP78395 509 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 PPATQ06203 517 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 HSPA14Q0VDF9 509 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 ITGB3BPQ13352 177 aaPredicted RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 KCNC3Q14003 757 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 BTG3Q14201 252 aaPredicted RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 PRKD1Q15139 912 aaPredicted RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 EPHA7Q15375 998 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 RPS6KA1Q15418 735 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 SEC23BQ15437 767 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 BAK1Q16611 211 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 PTGISQ16647 500 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 EXOC3L4Q17RC7 722 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 KNOP1Q1ED39 458 aaKnown RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 TMEM177Q53S58 311 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 HERC4Q5GLZ8 1057 aaPredicted RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 MFSD14BQ5SR56 506 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 PLEKHS1Q5SXH7 462 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 MPP7Q5T2T1 576 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 ATAD3BQ5T9A4 648 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 ATG16L1Q676U5 607 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 THOC7Q6I9Y2 204 aaKnown RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 KLHDC10Q6PID8 442 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 TRAT1Q6PIZ9 186 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 FAM111BQ6SJ93 734 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 METAP1DQ6UB28 335 aaPredicted RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 LINC00696Q6ZRV3 163 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 MSANTD1Q6ZTZ1 278 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 DENND5BQ6ZUT9 1274 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 NCCRP1Q6ZVX7 275 aaPredicted RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 BBS12Q6ZW61 710 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 MIGA2Q7L4E1 593 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 NLRP9Q7RTR0 991 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 ZNF571Q7Z3V5 609 aaPredicted RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 SPATA21Q7Z572 469 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 CROCCP2Q86T23 111 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 GPBP1Q86WP2 473 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 STX12Q86Y82 276 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 GSPT2Q8IYD1 628 aaKnown RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 ADGRF4Q8IZF3 695 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 FUKQ8N0W3 1084 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 SIX6OS1Q8N1H7 587 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 SCML4Q8N228 414 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 CDC26Q8NHZ8 85 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 OLIG1Q8TAK6 271 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 TBC1D16Q8TBP0 767 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 CALML6Q8TD86 181 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 STYXQ8WUJ0 223 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 KCNE4Q8WWG9 221 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 SLC13A3Q8WWT9 602 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 CASKIN2Q8WXE0 1202 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 P3H4Q92791 437 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 RFKQ969G6 155 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 LENG9Q96B70 501 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 DTNBP1Q96EV8 351 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 HES6Q96HZ4 224 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 TPD52L3Q96J77 140 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 PPP1R10Q96QC0 940 aaKnown RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 HNRNPABQ99729 332 aaKnown RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 ZDHHC5Q9C0B5 715 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 DEFB129Q9H1M3 183 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 CPVLQ9H3G5 476 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 C12orf65Q9H3J6 166 aaKnown RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 BRF2Q9HAW0 419 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 TMBIM4Q9HC24 238 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 NOD2Q9HC29 1040 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 EPB41L5Q9HCM4 733 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 FBRSL1Q9HCM7 1045 aaKnown RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 SIX2Q9NPC8 291 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 SERHLQ9NQF3 203 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 AGPAT3Q9NRZ7 376 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 CENPMQ9NSP4 180 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 OXSMQ9NWU1 459 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 HCFC1R1Q9NWW0 138 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 KCND2Q9NZV8 630 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 ARMCX3Q9UH62 379 aaPredicted RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 SLC12A6Q9UHW9 1150 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 SERPINB13Q9UIV8 391 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 CCNL1Q9UK58 526 aaPredicted RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 APPL1Q9UKG1 709 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 SPACA6W5XKT8 324 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 COL2A1P02458 1487 aaPredicted RBP4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 TAF1LQ8IZX4 1826 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 KIF13BQ9NQT8 1826 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 MYH10P35580 1976 aa4.03□□□□□ -1.76
PRPF38B-205ENST00000485810 ISM1B1AKI9 464 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 E9PI62 339 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 F8W8V4 182 aa4.02□□□□□ -1.77
PRPF38B-205ENST00000485810 PGRMC1O00264 195 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms