RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 GPS2Q13227 327 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 EZH2Q15910 746 aaKnown RBP4.85□□□□□ -1.63
SPTA1-207ENST00000485680 RPE65Q16518 533 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 USH1GQ495M9 461 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 MIDNQ504T8 468 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 VWA5B1Q5TIE3 1220 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 NCAPH2Q6IBW4 605 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 C17orf99Q6UX52 265 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 RAD9BQ6WBX8 426 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 ZNF793Q6ZN11 406 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 FAM57BQ71RH2 274 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 NIPA1Q7RTP0 329 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 CACNA2D4Q7Z3S7 1137 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 YTHDF3Q7Z739 585 aaKnown RBP4.85□□□□□ -1.63
SPTA1-207ENST00000485680 CTAGE6Q86UF2 777 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 TRIM74Q86UV6 250 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 TRIM73Q86UV7 250 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 GPBP1Q86WP2 473 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 CTAGE4Q8IX94 777 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 DDIASQ8IXT1 998 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 SYT2Q8N9I0 419 aaPredicted RBP4.85□□□□□ -1.63
SPTA1-207ENST00000485680 KIAA0895Q8NCT3 520 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 TNIP2Q8NFZ5 429 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 NEK11Q8NG66 645 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 GOLGA5Q8TBA6 731 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 ETNPPLQ8TBG4 499 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 ZCCHC10Q8TBK6 192 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 CRYGNQ8WXF5 182 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 NELL1Q92832 810 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 DNAJC19Q96DA6 116 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 ZNF419Q96HQ0 510 aaPredicted RBP4.85□□□□□ -1.63
SPTA1-207ENST00000485680 ALS2CR12Q96Q35 445 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 IFT27Q9BW83 186 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 HEMGNQ9BXL5 484 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 DEFB129Q9H1M3 183 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 RANBP17Q9H2T7 1088 aaKnown RBP4.85□□□□□ -1.63
SPTA1-207ENST00000485680 NHEJ1Q9H9Q4 299 aaPredicted RBP4.85□□□□□ -1.63
SPTA1-207ENST00000485680 VEZTQ9HBM0 779 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 LZTFL1Q9NQ48 299 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 OLA1Q9NTK5 396 aaKnown RBP4.85□□□□□ -1.63
SPTA1-207ENST00000485680 TMEM184CQ9NVA4 438 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 TMEM45AQ9NWC5 275 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 PEMTQ9UBM1 199 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 SEL1LQ9UBV2 794 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 LAMP3Q9UQV4 416 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 BZW2Q9Y6E2 419 aaKnown RBP4.85□□□□□ -1.63
SPTA1-207ENST00000485680 UBE4BO95155 1302 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 CDK5RAP2Q96SN8 1893 aa4.85□□□□□ -1.63
SPTA1-207ENST00000485680 BAZ2BQ9UIF8 2168 aaKnown RBP4.84□□□□□ -1.63
SPTA1-207ENST00000485680 DPPA5A6NC42 116 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 PABPN1LA6NDY0 278 aaKnown RBP4.84□□□□□ -1.63
SPTA1-207ENST00000485680 GAGE10A6NGK3 116 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 YDJCA8MPS7 323 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 PDXKO00764 312 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 WDR46O15213 610 aaKnown RBP4.84□□□□□ -1.63
SPTA1-207ENST00000485680 EIF3DO15371 548 aaKnown RBP eCLIP4.84□□□□□ -1.63
SPTA1-207ENST00000485680 MSH4O15457 936 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 TNFSF14O43557 240 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 EDIL3O43854 480 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 TACC1O75410 805 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 BAIAP3O94812 1187 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 CCDC172P0C7W6 258 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 EPB41P11171 864 aaKnown RBP4.84□□□□□ -1.63
SPTA1-207ENST00000485680 H2AFXP16104 143 aaPredicted RBP4.84□□□□□ -1.63
SPTA1-207ENST00000485680 CYP11B2P19099 503 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 CERS1P27544 350 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 HOXD9P28356 352 aaPredicted RBP4.84□□□□□ -1.63
SPTA1-207ENST00000485680 EPHA8P29322 1005 aaPredicted RBP4.84□□□□□ -1.63
SPTA1-207ENST00000485680 MAN1A1P33908 653 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 PRELPP51888 382 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 SLC12A3P55017 1021 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 UFM1P61960 85 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 EFNB1P98172 346 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 PPP2R5CQ13362 524 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 ALCAMQ13740 583 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 KNOP1Q1ED39 458 aaKnown RBP4.84□□□□□ -1.63
SPTA1-207ENST00000485680 SLC9B1Q4ZJI4 515 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 CEP55Q53EZ4 464 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 CCDC122Q5T0U0 273 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 SLC18B1Q6NT16 456 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 SLC2A7Q6PXP3 512 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 DSTYKQ6XUX3 929 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 MOB3CQ70IA8 216 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 VPS36Q86VN1 386 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 WDR5BQ86VZ2 330 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 CATSPER3Q86XQ3 398 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 KRT222Q8N1A0 295 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 RNF10Q8N5U6 811 aaKnown RBP4.84□□□□□ -1.63
SPTA1-207ENST00000485680 DNAAF1Q8NEP3 725 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 CMASQ8NFW8 434 aaPredicted RBP4.84□□□□□ -1.63
SPTA1-207ENST00000485680 TRIM58Q8NG06 486 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 NFKBIDQ8NI38 313 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 BCAS4Q8TDM0 211 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 UBE2Q2Q8WVN8 375 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 FAR1Q8WVX9 515 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 JAKMIP2Q96AA8 810 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 C7orf26Q96N11 449 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 FRG2BQ96QU4 278 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 SIGLEC11Q96RL6 698 aa4.84□□□□□ -1.63
SPTA1-207ENST00000485680 RIT2Q99578 217 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms