RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 ZDHHC6Q9H6R6 413 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 MLXIPLQ9NP71 852 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 ACSS2Q9NR19 701 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 CISHQ9NSE2 258 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 HESX1Q9UBX0 185 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 VPS51Q9UID3 782 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 OR1A2Q9Y585 309 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 PCDHGA9Q9Y5G4 932 aaKnown RBP5.34□□□□□ -1.55
PTPN4-210ENST00000485247 DIDO1Q9BTC0 2240 aaKnown RBP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 NIPBLQ6KC79 2804 aaeCLIP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 TRBV23OR9-2A0A075B6M9 112 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 ARGFXA6NJG6 315 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 C16orf96A6NNT2 1141 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 KCNU1A8MYU2 1149 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 TOR1BO14657 336 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 POLR1CO15160 346 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 PRICKLE3O43900 615 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 SUSD5O60279 629 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 NPHS1O60500 1241 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 ZNF821O75541 412 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 CREG1O75629 220 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 FAM155BO75949 473 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 FUCA1P04066 466 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 NAT2P11245 290 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 CD19P15391 556 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 ZNF28P17035 718 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 NFKBIAP25963 317 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 HNRNPH3P31942 346 aaKnown RBP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 CASP14P31944 242 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 CCNHP51946 323 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 HDAC4P56524 1084 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 SNRPFP62306 86 aaKnown RBP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 CHRNA6Q15825 494 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 SMTNL2Q2TAL5 461 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 FAM26FQ5R3K3 315 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 C1orf220Q5T0J3 134 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 SYPL2Q5VXT5 272 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 PAPD7Q5XG87 772 aaKnown RBP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 FBXL22Q6P050 247 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 TMEM71Q6P5X7 295 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 POMZP3Q6PJE2 187 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 CENPQQ7L2Z9 268 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 TTC7BQ86TV6 843 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 SLC47A2Q86VL8 602 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 ZNF227Q86WZ6 799 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 CCDC103Q8IW40 242 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 C12orf56Q8IXR9 622 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 IQCKQ8N0W5 287 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 SCML4Q8N228 414 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 RYBPQ8N488 228 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 RBMXL3Q8N7X1 1067 aaKnown RBP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 PDILTQ8N807 584 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 ATP6V0D2Q8N8Y2 350 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 GLIS1Q8NBF1 620 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 OR6K2Q8NGY2 324 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 KIAA1524Q8TCG1 905 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 CXorf40AQ8TE69 158 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 FNIP1Q8TF40 1166 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 IRGQQ8WZA9 623 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 RAB7BQ96AH8 199 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 FAM149B1Q96BN6 582 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 ARHGEF26Q96DR7 871 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 WDR92Q96MX6 357 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 CLIC6Q96NY7 704 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 PSMB7Q99436 277 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 PRMT1Q99873 361 aaKnown RBP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 ZPBPQ9BS86 351 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 WRAP53Q9BUR4 548 aaKnown RBP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 APOOQ9BUR5 198 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 ULBP3Q9BZM4 244 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 ING2Q9H160 280 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 MMRN2Q9H8L6 949 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 FBXO8Q9NRD0 319 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 SPATS2LQ9NUQ6 558 aaKnown RBP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 COPG2Q9UBF2 871 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 TMEFF2Q9UIK5 374 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-210ENST00000485247 VANGL2Q9ULK5 521 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 OSGIN2Q9Y236 505 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 COQ6Q9Y2Z9 468 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 DGKBQ9Y6T7 804 aa5.33□□□□□ -1.56
PTPN4-210ENST00000485247 MN1Q10571 1320 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-210ENST00000485247 SYNJ2BP-COX16A0A087WUM0 186 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 IGHV1OR21-1A0A087WYE8 117 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 A0A0D9SEW6 157 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 TMEM202A6NGA9 273 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 A6NL46 340 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 F5H423 210 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-210ENST00000485247 H3BQV1 296 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 IKBKBO14920 756 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 AREL1O15033 823 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 PPM1DO15297 605 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 BMP15O95972 392 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 PCCBP05166 539 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 FGF1P05230 155 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 TRIM49P0CI25 452 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 TRIM49CP0CI26 452 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 CD99P14209 185 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 COX6B1P14854 86 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 GPR3P46089 330 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms