RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 NFKBIL1Q9UBC1 381 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-227ENST00000485102 MYO1AQ9UBC5 1043 aa12.85□□□□□ -0.35
HDAC6-227ENST00000485102 EPHA6Q9UF33 1036 aa12.85□□□□□ -0.35
HDAC6-227ENST00000485102 KCND3Q9UK17 655 aa12.85□□□□□ -0.35
HDAC6-227ENST00000485102 PCDHGA6Q9Y5G7 932 aa12.85□□□□□ -0.35
HDAC6-227ENST00000485102 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.85□□□□□ -0.355e-8■■□□□ 14.2
HDAC6-227ENST00000485102 ESPL1Q14674 2120 aa12.85□□□□□ -0.35
HDAC6-227ENST00000485102 C1orf232A0A0U1RR37 186 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 MKRN2OSH3BPM6 223 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 MFSD11O43934 449 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 FGF5P12034 268 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 SLC19A1P41440 591 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 PPM1FP49593 454 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-227ENST00000485102 DCDC1P59894 354 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 NIPAL4Q0D2K0 466 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 QPCTQ16769 361 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 FIGNQ5HY92 759 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 NCBP2-AS2Q69YL0 99 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 ABRAXAS1Q6UWZ7 409 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 C6orf15Q6UXA7 325 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-227ENST00000485102 WASH2PQ6VEQ5 465 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 APLFQ8IW19 511 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-227ENST00000485102 RBM12BQ8IXT5 1001 aaKnown RBP12.84□□□□□ -0.35
HDAC6-227ENST00000485102 CCDC13Q8IYE1 715 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 ANP32BQ92688 251 aaKnown RBP12.84□□□□□ -0.35
HDAC6-227ENST00000485102 ULBP3Q9BZM4 244 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 RAB33BQ9H082 229 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 WASH6PQ9NQA3 447 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 PRDM8Q9NQV8 689 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 ATXN10Q9UBB4 475 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 POLHQ9Y253 713 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 PLAAQ9Y263 795 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 TP53TG5Q9Y2B4 290 aa12.84□□□□□ -0.35
HDAC6-227ENST00000485102 BZW2Q9Y6E2 419 aaKnown RBP12.84□□□□□ -0.35
HDAC6-227ENST00000485102 GOLGA6L6A8MZA4 724 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 MYO1FO00160 1098 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 SNX2O60749 519 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 UBXN7O94888 489 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 MT-ND3P03897 115 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 CYP1A2P05177 515 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 MMP2P08253 660 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 CD48P09326 243 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 ZNF8P17098 575 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-227ENST00000485102 MX2P20592 715 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 DLSTP36957 453 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 GFERP55789 205 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 MMRN1Q13201 1228 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 DPYSL3Q14195 570 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 KRT81Q14533 505 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 NR1I3Q14994 352 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 PDK2Q15119 407 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 HADHQ16836 314 aaKnown RBP12.83□□□□□ -0.36
HDAC6-227ENST00000485102 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.83□□□□□ -0.36
HDAC6-227ENST00000485102 HGSNATQ68CP4 663 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 C16orf46Q6P387 395 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 CYB5D1Q6P9G0 228 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 PRSS42Q7Z5A4 293 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 ATCAYQ86WG3 371 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 TEX19Q8NA77 164 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 LPCAT1Q8NF37 534 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 KLHL6Q8WZ60 621 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 SYN2Q92777 582 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-227ENST00000485102 FAF2Q96CS3 445 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 EID2BQ96D98 161 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 FCRL4Q96PJ5 515 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 ZNF670Q9BS34 389 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 ZSCAN5AQ9BUG6 496 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 ADGRE3Q9BY15 652 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 XPO4Q9C0E2 1151 aaKnown RBP12.83□□□□□ -0.36
HDAC6-227ENST00000485102 RAD18Q9NS91 495 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 KLC4Q9NSK0 619 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 POT1Q9NUX5 634 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 SCHIP1Q9P0W5 487 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-227ENST00000485102 ZNF624Q9P2J8 865 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-227ENST00000485102 KLHL3Q9UH77 587 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 CROTQ9UKG9 612 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 PADI1Q9ULC6 663 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 SLC30A1Q9Y6M5 507 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 MED13Q9UHV7 2174 aa12.83□□□□□ -0.36
HDAC6-227ENST00000485102 UNC79Q9P2D8 2635 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 C21orf140B9A014 251 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 SLC25A14O95258 325 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-227ENST00000485102 VIPP01282 170 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 HLA-DQB2P05538 268 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 SKILP12757 684 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 ZNF28P17035 718 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 MAPK9P45984 424 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 PMS2P54278 862 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 FOXM1Q08050 763 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 ATP1A1-AS1Q5TC04 95 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 AGAP9Q5VTM2 703 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 ADGRG6Q86SQ4 1221 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 BPHLQ86WA6 291 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-227ENST00000485102 TRAM1L1Q8N609 369 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 RNF214Q8ND24 703 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 SEC14L1Q92503 715 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 GLYATL1Q969I3 302 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 HDAC11Q96DB2 347 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 TIMM29Q9BSF4 260 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 THAP2Q9H0W7 228 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms