RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CELSR3Q9NYQ7 3312 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 PTPRQQ9UMZ3 2332 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 CCDC187A0A096LP49 1063 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 GLYATL1P3A0A0U1RQE8 302 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 STX7O15400 261 aaKnown RBP12.13□□□□□ -0.47
MSH5-216ENST00000484309 METTL18O95568 372 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 HGFP14210 728 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 PNLIPP16233 465 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 ITPKBP27987 946 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 ACTN2P35609 894 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 LSSP48449 732 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 INHBCP55103 352 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 TMPRSS15P98073 1019 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 CCDC173Q0VFZ6 552 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 SEPT7Q16181 437 aaKnown RBP12.13□□□□□ -0.47
MSH5-216ENST00000484309 INSCQ1MX18 579 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 COL28A1Q2UY09 1125 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 TBC1D25Q3MII6 688 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 MEI1Q5TIA1 1274 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 NKAIN2Q5VXU1 208 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 PDPK2PQ6A1A2 396 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 RANBP10Q6VN20 620 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 USP53Q70EK8 1073 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 OR4K2Q8NGD2 314 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 SLC35B2Q8TB61 432 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 NAT14Q8WUY8 206 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 C1orf54Q8WWF1 131 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 NUDT22Q9BRQ3 303 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 ZMYND15Q9H091 742 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 RMI1Q9H9A7 625 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 PRDM8Q9NQV8 689 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 PIH1D1Q9NWS0 290 aaKnown RBP12.13□□□□□ -0.47
MSH5-216ENST00000484309 SLC23A2Q9UGH3 650 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 FKBPLQ9UIM3 349 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 LHX6Q9UPM6 363 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 PKP3Q9Y446 797 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 ITPR1Q14643 2758 aa12.13□□□□□ -0.47
MSH5-216ENST00000484309 ZFHX4Q86UP3 3567 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 C5orf60A6NFR6 353 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 CCL22O00626 93 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 GAPDHSO14556 408 aaPredicted RBP12.12□□□□□ -0.47
MSH5-216ENST00000484309 CDK14O94921 469 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 EIF2S3P41091 472 aaKnown RBP12.12□□□□□ -0.47
MSH5-216ENST00000484309 SNX1Q13596 522 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 PEX6Q13608 980 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 RPS6KA1Q15418 735 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 PHF19Q5T6S3 580 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 ZNF438Q7Z4V0 828 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 PRUNE1Q86TP1 453 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 LRRTM4Q86VH4 590 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 SLC13A5Q86YT5 568 aaPredicted RBP12.12□□□□□ -0.47
MSH5-216ENST00000484309 TRAPPC5Q8IUR0 188 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 OR13C4Q8NGS5 318 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 WDR36Q8NI36 951 aaKnown RBP12.12□□□□□ -0.47
MSH5-216ENST00000484309 FGF11Q92914 225 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 PRR11Q96HE9 360 aaPredicted RBP12.12□□□□□ -0.47
MSH5-216ENST00000484309 ALS2CR12Q96Q35 445 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 VPS35Q96QK1 796 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 SEMA6CQ9H3T2 930 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 GRPEL1Q9HAV7 217 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 ASCL3Q9NQ33 180 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 KCNK4Q9NYG8 393 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 LAMA5O15230 3695 aa12.12□□□□□ -0.47
MSH5-216ENST00000484309 CCDC78A2IDD5 438 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 C2orf81A6NN90 581 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 CHUKO15111 745 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 KMOO15229 486 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 LIASO43766 372 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 TNFSF15O95150 251 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 PRAMEF1O95521 474 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 IFNB1P01574 187 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 F3P13726 295 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 ZNF7P17097 686 aaPredicted RBP12.11□□□□□ -0.47
MSH5-216ENST00000484309 TPH1P17752 444 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 LPOP22079 712 aaPredicted RBP12.11□□□□□ -0.47
MSH5-216ENST00000484309 MPSTP25325 297 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 RBMS1P29558 406 aaKnown RBP12.11□□□□□ -0.47
MSH5-216ENST00000484309 PBLDP30039 288 aaPredicted RBP12.11□□□□□ -0.47
MSH5-216ENST00000484309 CSF2RBP32927 897 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 MAPK9P45984 424 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 HHEXQ03014 270 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 TMEM115Q12893 351 aaPredicted RBP12.11□□□□□ -0.47
MSH5-216ENST00000484309 NFATC2Q13469 925 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 GTF2H3Q13889 308 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 TAF1AQ15573 450 aaPredicted RBP12.11□□□□□ -0.47
MSH5-216ENST00000484309 KCTD19Q17RG1 926 aaPredicted RBP12.11□□□□□ -0.47
MSH5-216ENST00000484309 PARP6Q2NL67 630 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 GPRC6AQ5T6X5 926 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 DENND5AQ6IQ26 1287 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 RAB11FIP2Q7L804 512 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 ZNF547Q8IVP9 402 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 SFRP1Q8N474 314 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 FBXO39Q8N4B4 442 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 RCBTB1Q8NDN9 531 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 SNIP1Q8TAD8 396 aaKnown RBP12.11□□□□□ -0.47
MSH5-216ENST00000484309 LIN37Q96GY3 246 aaPredicted RBP12.11□□□□□ -0.47
MSH5-216ENST00000484309 ZNF578Q96N58 590 aaPredicted RBP12.11□□□□□ -0.47
MSH5-216ENST00000484309 TMEM74Q96NL1 305 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 SLC38A3Q99624 504 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 STRADBQ9C0K7 418 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms