RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 IGLV3-16A0A075B6K0 115 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 A6NCN8 305 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 KMOO15229 486 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 UGT1A9O60656 530 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 CDK14O94921 469 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 MLNP12872 115 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 UGT1A6P19224 532 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 UGT1A1P22309 533 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 UGT1A4P22310 534 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 AK4P27144 223 aaPredicted RBP15.69■□□□□ 0.1
UPF3A-208ENST00000484246 CA5AP35218 305 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 UGT1A3P35503 534 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 UGT1A5P35504 534 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 PAFAH1B1P43034 410 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 TMEM115Q12893 351 aaPredicted RBP15.69■□□□□ 0.1
UPF3A-208ENST00000484246 PTK6Q13882 451 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 SEPT6Q14141 434 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 HLTFQ14527 1009 aaKnown RBP eCLIP15.69■□□□□ 0.1
UPF3A-208ENST00000484246 TRIP13Q15645 432 aaPredicted RBP15.69■□□□□ 0.1
UPF3A-208ENST00000484246 SKIDA1Q1XH10 827 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 C14orf28Q4W4Y0 310 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 CERCAMQ5T4B2 595 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 TSTD2Q5T7W7 516 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 GUSBP11Q6P575 273 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 SYDE1Q6ZW31 735 aaPredicted RBP15.69■□□□□ 0.1
UPF3A-208ENST00000484246 TMPRSS7Q7RTY8 843 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 LRRTM4Q86VH4 590 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 ZNF547Q8IVP9 402 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 NXPE1Q8N323 547 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 OR13J1Q8NGT2 312 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 HEXDCQ8WVB3 486 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 CPT1BQ92523 772 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 CDKN2AIPNLQ96HQ2 116 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 ZNF514Q96K75 400 aaPredicted RBP15.69■□□□□ 0.1
UPF3A-208ENST00000484246 DDX47Q9H0S4 455 aaKnown RBP15.69■□□□□ 0.1
UPF3A-208ENST00000484246 ASB8Q9H765 288 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 UGT1A7Q9HAW7 530 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 UGT1A10Q9HAW8 530 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 UGT1A8Q9HAW9 530 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 MRM3Q9HC36 420 aaKnown RBP15.69■□□□□ 0.1
UPF3A-208ENST00000484246 PIH1D1Q9NWS0 290 aaKnown RBP15.69■□□□□ 0.1
UPF3A-208ENST00000484246 PADI4Q9UM07 663 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 GPSM3Q9Y4H4 160 aa15.69■□□□□ 0.1
UPF3A-208ENST00000484246 ARID1BQ8NFD5 2236 aaPredicted RBP15.68■□□□□ 0.1
UPF3A-208ENST00000484246 ZFHX4Q86UP3 3567 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 ZNF106Q9H2Y7 1883 aaKnown RBP15.68■□□□□ 0.1
UPF3A-208ENST00000484246 TCRBV7S3A2A0A539 114 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 KLHL33A6NCF5 533 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 KCNJ13O60928 360 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 MTX2O75431 263 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 TMEM63AO94886 807 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 PNLIPP16233 465 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 MC4RP32245 332 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 ACTR1BP42025 376 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 PTGIRP43119 386 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 NPY2RP49146 381 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 VPS41P49754 854 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 ARSDP51689 593 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 ACTR1AP61163 376 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 SARNPP82979 210 aaKnown RBP15.68■□□□□ 0.1
UPF3A-208ENST00000484246 DMPKQ09013 629 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 FOXC1Q12948 553 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 GTF2H3Q13889 308 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 NR1D2Q14995 579 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 ZNF648Q5T619 568 aaPredicted RBP15.68■□□□□ 0.1
UPF3A-208ENST00000484246 EFL1Q7Z2Z2 1120 aaKnown RBP15.68■□□□□ 0.1
UPF3A-208ENST00000484246 ZNF438Q7Z4V0 828 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 C11orf96Q7Z7L8 435 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 GALNT15Q8N3T1 639 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 WDR48Q8TAF3 677 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 IFI44Q8TCB0 444 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 CAPZA3Q96KX2 299 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 ARFGAP3Q9NP61 516 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 SPATS2LQ9NUQ6 558 aaKnown RBP15.68■□□□□ 0.1
UPF3A-208ENST00000484246 BFARQ9NZS9 450 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 ZNHIT2Q9UHR6 403 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 ANGPTL2Q9UKU9 493 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 DNMT3AQ9Y6K1 912 aaPredicted RBP15.68■□□□□ 0.1
UPF3A-208ENST00000484246 SLC30A1Q9Y6M5 507 aa15.68■□□□□ 0.1
UPF3A-208ENST00000484246 B4DGG1 531 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 NUDT21O43809 227 aaKnown RBP15.67■□□□□ 0.1
UPF3A-208ENST00000484246 HYAL3O43820 417 aaPredicted RBP15.67■□□□□ 0.1
UPF3A-208ENST00000484246 ACP5P13686 325 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 GLB1P16278 677 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 CASQ1P31415 396 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 FOXN2P32314 431 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 MAGEA3P43357 314 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 CACNG1Q06432 222 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 TCEA2Q15560 299 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 BCL7AQ4VC05 210 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 PCID2Q5JVF3 399 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 ANKRD22Q5VYY1 191 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 SLC30A9Q6PML9 568 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 AFTPHQ6ULP2 937 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 DHRS13Q6UX07 377 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 SYT10Q6XYQ8 523 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 TMPRSS12Q86WS5 348 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 CHCHD4Q8N4Q1 142 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 PNPLA1Q8N8W4 532 aa15.67■□□□□ 0.1
UPF3A-208ENST00000484246 RASGEF1AQ8N9B8 481 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms