RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ZNF460Q14592 562 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 SYCP1Q15431 976 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 UGP2Q16851 508 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 MIIPQ5JXC2 388 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 CDKAL1Q5VV42 579 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 SCYL2Q6P3W7 929 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 BRAT1Q6PJG6 821 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 ATG14Q6ZNE5 492 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 TAF8Q7Z7C8 310 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 SLFN11Q7Z7L1 901 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 PHLDB2Q86SQ0 1253 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 CCDC185Q8N715 623 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 Q8N9G6 341 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-207ENST00000483407 FAM46DQ8NEK8 389 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 GPR156Q8NFN8 814 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 OR56A4Q8NGH8 313 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 GPT2Q8TD30 523 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 CENPIQ92674 756 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-207ENST00000483407 EXTL1Q92935 676 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 ZNF641Q96N77 438 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-207ENST00000483407 TUBGCP5Q96RT8 1024 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 RBM15Q96T37 977 aaKnown RBP eCLIP5.89□□□□□ -1.47
CSDE1-207ENST00000483407 NAA15Q9BXJ9 866 aaKnown RBP5.89□□□□□ -1.47
CSDE1-207ENST00000483407 TPSG1Q9NRR2 321 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 TMEFF2Q9UIK5 374 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-207ENST00000483407 MCM8Q9UJA3 840 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 NOCTQ9UK39 431 aaKnown RBP5.89□□□□□ -1.47
CSDE1-207ENST00000483407 APPL1Q9UKG1 709 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 NEU3Q9UQ49 428 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 COQ6Q9Y2Z9 468 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 OR1A2Q9Y585 309 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 DGKBQ9Y6T7 804 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 NYNRINQ9P2P1 1898 aaKnown RBP5.89□□□□□ -1.47
CSDE1-207ENST00000483407 MYLKQ15746 1914 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 MGAQ8IWI9 3026 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 A0A1W2PQC6 194 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 TSPAN11A1L157 253 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 CFAP69A5D8W1 941 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 WASH4PA8MWX3 477 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 CASC3O15234 703 aaKnown RBP5.88□□□□□ -1.47
CSDE1-207ENST00000483407 GSC2O15499 205 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 INSIG1O15503 277 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 FGF10O15520 208 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-207ENST00000483407 NUDT21O43809 227 aaKnown RBP5.88□□□□□ -1.47
CSDE1-207ENST00000483407 NOBOXO60393 691 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 IGLV1-40P01703 118 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 CALB1P05937 261 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 H2AFB1P0C5Y9 115 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 H2AFB2P0C5Z0 115 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 KRT10P13645 584 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 ITIH1P19827 911 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 EEF1GP26641 437 aaKnown RBP5.88□□□□□ -1.47
CSDE1-207ENST00000483407 SERPINA4P29622 427 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 HTR7P34969 479 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 RFC1P35251 1148 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-207ENST00000483407 STAT1P42224 750 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 MAPK10P53779 464 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 AIF1P55008 147 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 GSCP56915 257 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-207ENST00000483407 KIAA1024LP59773 190 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 GPR85P60893 370 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 POLR2FP61218 127 aaKnown RBP5.88□□□□□ -1.47
CSDE1-207ENST00000483407 FMO1Q01740 532 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 ZFP36L1Q07352 338 aaKnown RBP5.88□□□□□ -1.47
CSDE1-207ENST00000483407 BIRC2Q13490 618 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 PEX6Q13608 980 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 TGIF1Q15583 401 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 LINC00303Q3SY05 128 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 MAP9Q49MG5 647 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 C14orf28Q4W4Y0 310 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 RAB6CQ53S08 254 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 HSP90AA4PQ58FG1 418 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 FKBP15Q5T1M5 1219 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 CERCAMQ5T4B2 595 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 PHF19Q5T6S3 580 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 DPY19L2P1Q6NXN4 242 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 WDR59Q6PJI9 974 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 RNF111Q6ZNA4 994 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 SPRED1Q7Z699 444 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 STRA8Q7Z7C7 330 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 CCDC103Q8IW40 242 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 UMODL1-AS1Q8N2C9 162 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 EXD3Q8N9H8 876 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 NETO2Q8NC67 525 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 C3orf20Q8ND61 904 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 JOSD2Q8TAC2 188 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 SLC30A5Q8TAD4 765 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 KIAA1524Q8TCG1 905 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 SLC20A1Q8WUM9 679 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 USP7Q93009 1102 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 VOPP1Q96AW1 172 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 PDXPQ96GD0 296 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 MAGEB5Q9BZ81 275 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 B3GNT4Q9C0J1 378 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 RAB6CQ9H0N0 254 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 DPEP2Q9H4A9 486 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 WDR26Q9H7D7 661 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 ATP13A3Q9H7F0 1226 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 SEMA3GQ9NS98 782 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 STARD5Q9NSY2 213 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms