RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 PADI4Q9UM07 663 aa16.4■□□□□ 0.22
HMGN1-214ENST00000482733 U3KQA8 63 aa16.4■□□□□ 0.22
HMGN1-214ENST00000482733 AGAP14A8MT82 685 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 KMOO15229 486 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 FANCGO15287 622 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 MSH3P20585 1137 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 AK4P27144 223 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-214ENST00000482733 MC4RP32245 332 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 ACTR1BP42025 376 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 CLCNKAP51800 687 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 ACTR1AP61163 376 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 SHC2P98077 582 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 KCNJ11Q14654 390 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 PCID2Q5JVF3 399 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 ZNF648Q5T619 568 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-214ENST00000482733 ARMC3Q5W041 872 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 LRRC8BQ6P9F7 803 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 SLC30A9Q6PML9 568 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 CHST15Q7LFX5 561 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-214ENST00000482733 LRRTM4Q86VH4 590 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 GALNT15Q8N3T1 639 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 KYQ8NBH2 561 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 GPR156Q8NFN8 814 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 IFI44Q8TCB0 444 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 CDKN2AIPNLQ96HQ2 116 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 ZNF514Q96K75 400 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-214ENST00000482733 DDX47Q9H0S4 455 aaKnown RBP16.39■□□□□ 0.21
HMGN1-214ENST00000482733 SPATS2LQ9NUQ6 558 aaKnown RBP16.39■□□□□ 0.21
HMGN1-214ENST00000482733 SIRPGQ9P1W8 387 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 CRLS1Q9UJA2 301 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 TCAF1Q9Y4C2 921 aa16.39■□□□□ 0.21
HMGN1-214ENST00000482733 CPED1A4D0V7 1026 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 KCNJ13O60928 360 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 MTX2O75431 263 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 RALBP11234 206 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 MYF5P13349 255 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 ACP5P13686 325 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 SESN2P58004 480 aaPredicted RBP16.38■□□□□ 0.21
HMGN1-214ENST00000482733 SMAD1Q15797 465 aaKnown RBP16.38■□□□□ 0.21
HMGN1-214ENST00000482733 C14orf28Q4W4Y0 310 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 CCDC38Q502W7 563 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 TSTD2Q5T7W7 516 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 DHRS13Q6UX07 377 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 SYT10Q6XYQ8 523 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 SYDE1Q6ZW31 735 aaPredicted RBP16.38■□□□□ 0.21
HMGN1-214ENST00000482733 EFL1Q7Z2Z2 1120 aaKnown RBP16.38■□□□□ 0.21
HMGN1-214ENST00000482733 CHCHD4Q8N4Q1 142 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 MCUQ8NE86 351 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 ZDHHC1Q8WTX9 485 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 TRIM44Q96DX7 344 aaPredicted RBP16.38■□□□□ 0.21
HMGN1-214ENST00000482733 DCUN1D1Q96GG9 259 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 TIMM29Q9BSF4 260 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 ANGPTL2Q9UKU9 493 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 WASF3Q9UPY6 502 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 PRKAB1Q9Y478 270 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 PLEKHM1Q9Y4G2 1056 aa16.38■□□□□ 0.21
HMGN1-214ENST00000482733 DNMT3AQ9Y6K1 912 aaPredicted RBP16.38■□□□□ 0.21
HMGN1-214ENST00000482733 B4DGG1 531 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 CFAP99D6REC4 459 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 GPR39O43194 453 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 NOBOXO60393 691 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 MLNP12872 115 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 SLC2A4P14672 509 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 VCLP18206 1134 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 AKT1P31749 480 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 ACVR1Q04771 509 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 CACNG1Q06432 222 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 PTK6Q13882 451 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 KHDC1Q4VXA5 237 aaKnown RBP16.37■□□□□ 0.21
HMGN1-214ENST00000482733 ZRANB3Q5FWF4 1079 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 GUSBP11Q6P575 273 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 CRTC3Q6UUV7 619 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 TMPRSS7Q7RTY8 843 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 PCGF5Q86SE9 256 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 TMPRSS12Q86WS5 348 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 TRAPPC5Q8IUR0 188 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 NXPE1Q8N323 547 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 WDR48Q8TAF3 677 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 CPT1BQ92523 772 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 COPS8Q99627 209 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 ABCG4Q9H172 646 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 XAB2Q9HCS7 855 aaKnown RBP16.37■□□□□ 0.21
HMGN1-214ENST00000482733 NEUROG3Q9Y4Z2 214 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 PCYT1BQ9Y5K3 369 aaPredicted RBP16.37■□□□□ 0.21
HMGN1-214ENST00000482733 ST14Q9Y5Y6 855 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 LRP4O75096 1905 aa16.37■□□□□ 0.21
HMGN1-214ENST00000482733 TRBV5-4A0A0C4DH59 114 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 TCRBV7S3A2A0A539 114 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 FAM221BA6H8Z2 402 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 KLHL33A6NCF5 533 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 CCL22O00626 93 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 NUDT21O43809 227 aaKnown RBP16.36■□□□□ 0.21
HMGN1-214ENST00000482733 HYAL3O43820 417 aaPredicted RBP16.36■□□□□ 0.21
HMGN1-214ENST00000482733 TUBB4AP04350 444 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 PNLIPP16233 465 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 GLB1P16278 677 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 ZNF7P17097 686 aaPredicted RBP16.36■□□□□ 0.21
HMGN1-214ENST00000482733 DR1Q01658 176 aa16.36■□□□□ 0.21
HMGN1-214ENST00000482733 HLTFQ14527 1009 aaKnown RBP eCLIP16.36■□□□□ 0.21
HMGN1-214ENST00000482733 INSCQ1MX18 579 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms