RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 SH3BP1Q9Y3L3 701 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 COL4A4P53420 1690 aaPredicted RBP7.75□□□□□ -1.17
SNX13-208ENST00000482558 SYNJ2BP-COX16A0A087WUM0 186 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 PGPEP1LA6NFU8 196 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 CASTOR2A6NHX0 329 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 ARHGAP42A6NI28 874 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 OR6C75A6NL08 312 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 FOXO6A8MYZ6 492 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 GOLGA8RI6L899 631 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 MATN3O15232 486 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 NUAK1O60285 661 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 HAUS5O94927 633 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 RTN3O95197 1032 aaPredicted RBP7.74□□□□□ -1.17
SNX13-208ENST00000482558 ATP6V1G2O95670 118 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 ITGA2BP08514 1039 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 CSH1P0DML2 217 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 CSH2P0DML3 217 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 MTHFD1P11586 935 aaKnown RBP7.74□□□□□ -1.17
SNX13-208ENST00000482558 COL6A2P12110 1019 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 OSMP13725 252 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 PAMP19021 973 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 MGAT1P26572 445 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 PSMB4P28070 264 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 BMP8BP34820 402 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 KPNA2P52292 529 aaKnown RBP7.74□□□□□ -1.17
SNX13-208ENST00000482558 SLC16A1P53985 500 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 GEMP55040 296 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 PCBP3P57721 371 aaKnown RBP7.74□□□□□ -1.17
SNX13-208ENST00000482558 SESN2P58004 480 aaPredicted RBP7.74□□□□□ -1.17
SNX13-208ENST00000482558 BPIFB3P59826 476 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 NOGQ13253 232 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 STX3Q13277 289 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 EIF4EBP2Q13542 120 aaPredicted RBP7.74□□□□□ -1.17
SNX13-208ENST00000482558 MPEG1Q2M385 716 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 DPY19L1Q2PZI1 675 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 TOR2AQ5JU69 321 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 WASHC2DQ5SRD0 308 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 KCTD11Q693B1 232 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 MSANTD2Q6P1R3 559 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 BHLHA9Q7RTU4 235 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 CLNKQ7Z7G1 428 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 GALNT13Q8IUC8 556 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 LIX1LQ8IVB5 337 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 ATPAF2Q8N5M1 289 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 DNAAF3Q8N9W5 541 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 KREMEN2Q8NCW0 462 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 PPP1R14CQ8TAE6 165 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 DQX1Q8TE96 717 aaKnown RBP7.74□□□□□ -1.17
SNX13-208ENST00000482558 C2orf15Q8WU43 125 aaKnown RBP7.74□□□□□ -1.17
SNX13-208ENST00000482558 ARNTL2Q8WYA1 636 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 UBE2FQ969M7 185 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 NSL1Q96IY1 281 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 C20orf173Q96LM9 149 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 FCRL5Q96RD9 977 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 KCNK16Q96T55 309 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 RTP3Q9BQQ7 232 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 BOCQ9BWV1 1114 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 TLE6Q9H808 572 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 CNTD2Q9H8S5 307 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 AGO3Q9H9G7 860 aaKnown RBP7.74□□□□□ -1.17
SNX13-208ENST00000482558 SLCO1B3Q9NPD5 702 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 ENTPD7Q9NQZ7 604 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 PLSCR4Q9NRQ2 329 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 TBC1D13Q9NVG8 400 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 MIOSQ9NXC5 875 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 COX16Q9P0S2 106 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 SLC17A7Q9P2U7 560 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 SCML2Q9UQR0 700 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 CHKBQ9Y259 395 aa7.74□□□□□ -1.17
SNX13-208ENST00000482558 A0A1W2PPH5 198 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 TRIM64CA6NLI5 447 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 CXorf49A8MYA2 514 aaPredicted RBP7.73□□□□□ -1.17
SNX13-208ENST00000482558 TMEM114B3SHH9 223 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 H7C4K7 107 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 WNT9AO14904 365 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 SNNO75324 88 aaPredicted RBP7.73□□□□□ -1.17
SNX13-208ENST00000482558 NEBLO76041 1014 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 KLHL2O95198 593 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 POMCP01189 267 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 SERPINE1P05121 402 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 DLDP09622 509 aaKnown RBP7.73□□□□□ -1.17
SNX13-208ENST00000482558 ATP6V1B1P15313 513 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 ALOX12P18054 663 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 BGNP21810 368 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 ENPP1P22413 925 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 TYK2P29597 1187 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 PEX19P40855 299 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 MAGEA12P43365 314 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 TUBP50607 506 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 NDST2P52849 883 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 LIMK2P53671 638 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 PRMT2P55345 433 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 SP3Q02447 781 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 TLE2Q04725 743 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 DSC1Q08554 894 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 MPP3Q13368 585 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 TRIM71Q2Q1W2 868 aaKnown RBP7.73□□□□□ -1.17
SNX13-208ENST00000482558 ANKRD20A4Q4UJ75 823 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 NOMO2Q5JPE7 1267 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 PCID2Q5JVF3 399 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms