RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ELMSAN1Q6PJG2 1045 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 LPCAT1Q8NF37 534 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 OR4K2Q8NGD2 314 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 TOP1MTQ969P6 601 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 ZNF419Q96HQ0 510 aaPredicted RBP12.62□□□□□ -0.39
VPS52-218ENST00000482399 SLC30A3Q99726 388 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 MARCH7Q9H992 704 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 AGPAT4Q9NRZ5 378 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 WDR70Q9NW82 654 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 RAMP2O60895 175 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 PORP16435 677 aaPredicted RBP12.62□□□□□ -0.39
VPS52-218ENST00000482399 SERPINB1P30740 379 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 OPRL1P41146 370 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 CREB5Q02930 508 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 SLC39A12Q504Y0 691 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 SIRPB2Q5JXA9 342 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 ANKRD26P1Q6NSI1 321 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 THEM5Q8N1Q8 247 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 SNX19Q92543 992 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 AURKBQ96GD4 344 aaPredicted RBP12.62□□□□□ -0.39
VPS52-218ENST00000482399 ZNF385DQ9H6B1 395 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 HPS4Q9NQG7 708 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 PRDM8Q9NQV8 689 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.62□□□□□ -0.39
VPS52-218ENST00000482399 DERAQ9Y315 318 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 SLC12A8A0AV02 714 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 BBIP1A8MTZ0 92 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 H0Y858 1186 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 GPR182O15218 404 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 NIPSNAP2O75323 286 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 FADS2O95864 444 aaKnown RBP12.61□□□□□ -0.39
VPS52-218ENST00000482399 PIM1P11309 404 aaPredicted RBP12.61□□□□□ -0.39
VPS52-218ENST00000482399 SHMT2P34897 504 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 SCNN1AP37088 669 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 ARSFP54793 590 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 TPTEP56180 551 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 DMPKQ09013 629 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 LCP2Q13094 533 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 MFSD10Q14728 455 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 SLC36A3Q495N2 470 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 TMEM236Q5W0B7 351 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 UGT3A1Q6NUS8 523 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 Q6ZNX1 250 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 LRRC8DQ7L1W4 858 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 PAGE2Q7Z2X7 111 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 BTLAQ7Z6A9 289 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 GPSM1Q86YR5 675 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 OR4L1Q8NH43 312 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 ACDQ96AP0 544 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 MAELQ96JY0 434 aaKnown RBP12.61□□□□□ -0.39
VPS52-218ENST00000482399 MYRFLQ96LU7 910 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 SEZ6LQ9BYH1 1024 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 DDX28Q9NUL7 540 aaKnown RBP12.61□□□□□ -0.39
VPS52-218ENST00000482399 ATAD3AQ9NVI7 634 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 VPS4AQ9UN37 437 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 LOC100506127A0A0U1RQW1 187 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 H0Y626 953 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 LRATO95237 230 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 TRIM16O95361 564 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 HSMCR30P0CW71 290 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 EFNA1P20827 205 aaPredicted RBP12.61□□□□□ -0.39
VPS52-218ENST00000482399 WARSP23381 471 aaKnown RBP12.61□□□□□ -0.39
VPS52-218ENST00000482399 DNAJB2P25686 324 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 PGFP49763 221 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 NKX2-5P52952 324 aaPredicted RBP12.61□□□□□ -0.39
VPS52-218ENST00000482399 DNAJB13P59910 316 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 VBP1P61758 197 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 MADCAM1Q13477 382 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 ZBTB6Q15916 424 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 INAQ16352 499 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 ALFQ53S48 1182 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 NOL9Q5SY16 702 aaKnown RBP12.61□□□□□ -0.39
VPS52-218ENST00000482399 TAPT1Q6NXT6 567 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 PHACTR4Q8IZ21 702 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 SIDT2Q8NBJ9 832 aaKnown RBP12.61□□□□□ -0.39
VPS52-218ENST00000482399 C3orf58Q8NDZ4 430 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 OR2T12Q8NG77 320 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 CNIH3Q8TBE1 160 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 CAPSLQ8WWF8 208 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 MYOCQ99972 504 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 RERGLQ9H628 205 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 HMG20AQ9NP66 347 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 GDAP2Q9NXN4 497 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 PSME2Q9UL46 239 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 PDE10AQ9Y233 779 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 INVSQ9Y283 1065 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 PKP3Q9Y446 797 aa12.61□□□□□ -0.39
VPS52-218ENST00000482399 F8W810 466 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 ARVCFO00192 962 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 GPR39O43194 453 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 TLR5O60602 858 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 ECI2O75521 394 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 CNMDO75829 334 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 INMTO95050 263 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 RASAL1O95294 804 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 CAPN1P07384 714 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 ZNF12P17014 697 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 TRPC1P48995 793 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 CCT8P50990 548 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 TBX4P57082 545 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms