RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 SPATA16Q9BXB7 569 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 FZD3Q9NPG1 666 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 APPL1Q9UKG1 709 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 RAB21Q9UL25 225 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 FAM169AQ9Y6X4 670 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 ZCWPW2A0A1B0GU75 182 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 A0A1W2PPC4 97 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 SRP72O76094 671 aaKnown RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 HNRNPA2B1P22626 353 aaKnown RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 PSMA3P25788 255 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 MAOBP27338 520 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 SSTR1P30872 391 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 DCDC1P59894 354 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 DPTQ07507 201 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 KYNUQ16719 465 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 SPANXN3Q5MJ09 141 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 HENMT1Q5T8I9 393 aaKnown RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 RAET1GQ6H3X3 334 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 CAPN12Q6ZSI9 719 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 C3orf62Q6ZUJ4 267 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 NEK10Q6ZWH5 1172 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 ZNF765Q7L2R6 523 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 RELL1Q8IUW5 271 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 RGL4Q8IZJ4 473 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 TP53I13Q8NBR0 393 aaPredicted RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 SPDL1Q96EA4 605 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 LENG8Q96PV6 779 aaPredicted RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 KLF6Q99612 283 aaPredicted RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 MBNL1Q9NR56 388 aaKnown RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 EIF2B4Q9UI10 523 aaKnown RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 ADAM21Q9UKJ8 722 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 DMTF1Q9Y222 760 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 ATXN2Q99700 1313 aaKnown RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 SPAG17Q6Q759 2223 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 CCDC162PA2VCL2 907 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 OR51F1A6NGY5 319 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 PRAMEF26H0Y7S4 382 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 H7C0S8 307 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 RAD51BO15315 384 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 PRAMEF1O95521 474 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 GOT2P00505 430 aaKnown RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 PCCBP05166 539 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 EZRP15311 586 aaKnown RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 CD27P26842 260 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 AKT2P31751 481 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 MC4RP32245 332 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 NUDT1P36639 197 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 PTGER3P43115 390 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 GPR1P46091 355 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 DHPSP49366 369 aaPredicted RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 XIAPP98170 497 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 PEX6Q13608 980 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 CUL3Q13618 768 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 SIM2Q14190 667 aaPredicted RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 INPP5AQ14642 412 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 IRF4Q15306 451 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 CHRNA6Q15825 494 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 LONRF1Q17RB8 773 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 PLK5Q496M5 336 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 ZRANB3Q5FWF4 1079 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 KIAA0930Q6ICG6 404 aaPredicted RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 PNCKQ6P2M8 343 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 PTAR1Q7Z6K3 402 aaPredicted RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 NLRP8Q86W28 1048 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 SLC7A5P1Q8MH63 180 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 ARL6IP6Q8N6S5 226 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 PLA2G15Q8NCC3 412 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 ZNF398Q8TD17 642 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 SERAC1Q96JX3 654 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 AGAP2Q99490 1192 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 PRRX2Q99811 253 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 ZSCAN5AQ9BUG6 496 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 MIR1-1HGQ9H1L0 117 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 CDC42EP4Q9H3Q1 356 aaKnown RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 SEMA4AQ9H3S1 761 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 ASB8Q9H765 288 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 VPS37BQ9H9H4 285 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 LRRC4CQ9HCJ2 640 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 PPANQ9NQ55 473 aaKnown RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 IL1RAPL1Q9NZN1 696 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 NFKBIL1Q9UBC1 381 aaPredicted RBP11.5□□□□□ -0.57
HPS4-212ENST00000481910 CUL9Q8IWT3 2517 aa11.5□□□□□ -0.57
HPS4-212ENST00000481910 PLXNA2O75051 1894 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 GOLGA8KD6RF30 607 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 GOLGA8TH3BQL2 631 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 K7ESM1 405 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 GAPDHSO14556 408 aaPredicted RBP11.49□□□□□ -0.57
HPS4-212ENST00000481910 FPGTO14772 594 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 UGT1A9O60656 530 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 LILRB5O75023 590 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 RHOBTB1O94844 696 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 UGT1A6P19224 532 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 UGT1A1P22309 533 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 UGT1A4P22310 534 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 ARNTP27540 789 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 UGT1A3P35503 534 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 UGT1A5P35504 534 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 PMS2P54278 862 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 ITGA9Q13797 1035 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms