RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 ACADLP28330 430 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 ACSL1P33121 698 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 THBS3P49746 956 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 TAS2R38P59533 333 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 SEC61A1P61619 476 aaKnown RBP3.78□□□□□ -1.8
CBX3-207ENST00000481300 TUBA1BP68363 451 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 MRPS5P82675 430 aaKnown RBP3.78□□□□□ -1.8
CBX3-207ENST00000481300 PDE1BQ01064 536 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 TNFAIP1Q13829 316 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 KCNC3Q14003 757 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 SLC39A14Q15043 492 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 DECR1Q16698 335 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 MFSD4BQ5TF39 518 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 CLEC17AQ6ZS10 378 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 MEPCEQ7L2J0 689 aaKnown RBP3.78□□□□□ -1.8
CBX3-207ENST00000481300 ENOSF1Q7L5Y1 443 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 TSPAN33Q86UF1 283 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 OR2AK2Q8NG84 335 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 TRPC4APQ8TEL6 797 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 TANKQ92844 425 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 TAAR8Q969N4 342 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 RTP4Q96DX8 246 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 SCMH1Q96GD3 660 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 MED30Q96HR3 178 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 EGLN2Q96KS0 407 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 MARK4Q96L34 752 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 MTERF1Q99551 399 aaKnown RBP3.78□□□□□ -1.8
CBX3-207ENST00000481300 MXD3Q9BW11 206 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 TMEM39BQ9GZU3 492 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 HIPK2Q9H2X6 1198 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 PCDH9Q9HC56 1237 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 SMARCAL1Q9NZC9 954 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 ZNF224Q9NZL3 707 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 MRPL15Q9P015 296 aaKnown RBP3.78□□□□□ -1.8
CBX3-207ENST00000481300 CHORDC1Q9UHD1 332 aaPredicted RBP3.78□□□□□ -1.8
CBX3-207ENST00000481300 SIX4Q9UIU6 781 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 DBNLQ9UJU6 430 aaKnown RBP3.78□□□□□ -1.8
CBX3-207ENST00000481300 FBXL2Q9UKC9 423 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 KLHL20Q9Y2M5 609 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 AMDHD2Q9Y303 409 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 MAGI3Q5TCQ9 1506 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 EHBP1L1Q8N3D4 1523 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 KDM5BQ9UGL1 1544 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 CHD1O14646 1710 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 MIA2Q96PC5 1412 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 RAPGEF6Q8TEU7 1601 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 CNTNAP2Q9UHC6 1331 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 GPATCH8Q9UKJ3 1502 aaKnown RBP3.77□□□□□ -1.81
CBX3-207ENST00000481300 A8MV72 311 aaPredicted RBP3.77□□□□□ -1.81
CBX3-207ENST00000481300 SMAD9O15198 467 aaKnown RBP3.77□□□□□ -1.81
CBX3-207ENST00000481300 KCNN4O15554 427 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 SMAD6O43541 496 aaKnown RBP3.77□□□□□ -1.81
CBX3-207ENST00000481300 MITFO75030 526 aaPredicted RBP3.77□□□□□ -1.81
CBX3-207ENST00000481300 TMCC2O75069 709 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 BEST1O76090 585 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 KDM4BO94953 1096 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 KCNK5O95279 499 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 PAPSS2O95340 614 aaPredicted RBP3.77□□□□□ -1.81
CBX3-207ENST00000481300 TSPY4P0CV99 314 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 TSPY10P0CW01 314 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 DAOP14920 347 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 ZNF12P17014 697 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 TMPOP42166 694 aaKnown RBP3.77□□□□□ -1.81
CBX3-207ENST00000481300 NRIP1P48552 1158 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 LMAN1P49257 510 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 RRP1P56182 461 aaKnown RBP3.77□□□□□ -1.81
CBX3-207ENST00000481300 DSCR9P59020 149 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 NFATC4Q14934 902 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 NTRK2Q16620 822 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 RARS2Q5T160 578 aaKnown RBP3.77□□□□□ -1.81
CBX3-207ENST00000481300 ZNF280DQ6N043 979 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 CHERPQ8IWX8 916 aaKnown RBP3.77□□□□□ -1.81
CBX3-207ENST00000481300 SCYL3Q8IZE3 742 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 GSDMBQ8TAX9 411 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 ADGRG7Q96K78 797 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 QRFPRQ96P65 431 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 ZNF385AQ96PM9 386 aaKnown RBP3.77□□□□□ -1.81
CBX3-207ENST00000481300 SEMA3CQ99985 751 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 OSGEPL1Q9H4B0 414 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 DNAJC18Q9H819 358 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 ARHGEF38Q9NXL2 777 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 C1RLQ9NZP8 487 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 MALT1Q9UDY8 824 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 SEC63Q9UGP8 760 aaKnown RBP3.77□□□□□ -1.81
CBX3-207ENST00000481300 EXO1Q9UQ84 846 aaKnown RBP3.77□□□□□ -1.81
CBX3-207ENST00000481300 VDAC3Q9Y277 283 aa3.77□□□□□ -1.81
CBX3-207ENST00000481300 ABCC10Q5T3U5 1492 aa3.76□□□□□ -1.81
CBX3-207ENST00000481300 WDR7Q9Y4E6 1490 aa3.76□□□□□ -1.81
CBX3-207ENST00000481300 CLEC18AA5D8T8 446 aa3.76□□□□□ -1.81
CBX3-207ENST00000481300 GNL1P36915 607 aaPredicted RBP3.76□□□□□ -1.81
CBX3-207ENST00000481300 NNMTP40261 264 aa3.76□□□□□ -1.81
CBX3-207ENST00000481300 APOBEC1P41238 236 aaKnown RBP3.76□□□□□ -1.81
CBX3-207ENST00000481300 ZXDBP98169 803 aa3.76□□□□□ -1.81
CBX3-207ENST00000481300 NUCB1Q02818 461 aa3.76□□□□□ -1.81
CBX3-207ENST00000481300 CALD1Q05682 793 aaKnown RBP3.76□□□□□ -1.81
CBX3-207ENST00000481300 ZNF155Q12901 538 aaPredicted RBP3.76□□□□□ -1.81
CBX3-207ENST00000481300 DLG1Q12959 904 aa3.76□□□□□ -1.81
CBX3-207ENST00000481300 KRT33BQ14525 404 aa3.76□□□□□ -1.81
CBX3-207ENST00000481300 SF3B4Q15427 424 aaKnown RBP eCLIP3.76□□□□□ -1.81
CBX3-207ENST00000481300 NSUN5P2Q63ZY6 315 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms