RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 PLEKHG4BQ96PX9 1271 aa12.72□□□□□ -0.37
ABCF3-215ENST00000481116 TBL1YQ9BQ87 522 aa12.72□□□□□ -0.37
ABCF3-215ENST00000481116 SEMA6CQ9H3T2 930 aa12.72□□□□□ -0.37
ABCF3-215ENST00000481116 TRABDQ9H4I3 376 aa12.72□□□□□ -0.37
ABCF3-215ENST00000481116 RMI1Q9H9A7 625 aa12.72□□□□□ -0.37
ABCF3-215ENST00000481116 PRDM8Q9NQV8 689 aa12.72□□□□□ -0.37
ABCF3-215ENST00000481116 KLC4Q9NSK0 619 aa12.72□□□□□ -0.37
ABCF3-215ENST00000481116 HACD3Q9P035 362 aa12.72□□□□□ -0.37
ABCF3-215ENST00000481116 AAR2Q9Y312 384 aaKnown RBP12.72□□□□□ -0.37
ABCF3-215ENST00000481116 PKD1L2Q7Z442 2459 aa12.72□□□□□ -0.37
ABCF3-215ENST00000481116 NBEAQ8NFP9 2946 aa12.72□□□□□ -0.37
ABCF3-215ENST00000481116 STX7O15400 261 aaKnown RBP12.71□□□□□ -0.37
ABCF3-215ENST00000481116 METTL18O95568 372 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 ACTN2P35609 894 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 SPAM1P38567 509 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 EIF2S3P41091 472 aaKnown RBP12.71□□□□□ -0.37
ABCF3-215ENST00000481116 INHBCP55103 352 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 MSLNQ13421 630 aaPredicted RBP12.71□□□□□ -0.37
ABCF3-215ENST00000481116 LRP8Q14114 963 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 SEL1L2Q5TEA6 688 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 PDPK2PQ6A1A2 396 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 DENND5AQ6IQ26 1287 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 ARHGEF18Q6ZSZ5 1173 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 ZNF438Q7Z4V0 828 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 PRUNE1Q86TP1 453 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 ZNF547Q8IVP9 402 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 OR4K2Q8NGD2 314 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 OR13C4Q8NGS5 318 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 NAT14Q8WUY8 206 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 C1orf54Q8WWF1 131 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 FGF11Q92914 225 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 VPS35Q96QK1 796 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 NUDT22Q9BRQ3 303 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 OSGEPL1Q9H4B0 414 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 ASCL3Q9NQ33 180 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 PIH1D1Q9NWS0 290 aaKnown RBP12.71□□□□□ -0.37
ABCF3-215ENST00000481116 LHX6Q9UPM6 363 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 DNAJC16Q9Y2G8 782 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 PKP3Q9Y446 797 aa12.71□□□□□ -0.37
ABCF3-215ENST00000481116 PIKFYVEQ9Y2I7 2098 aa12.71□□□□□ -0.38
ABCF3-215ENST00000481116 A0A087WV48 116 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 CCDC187A0A096LP49 1063 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 GLYATL1P3A0A0U1RQE8 302 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 CCL22O00626 93 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 CHUKO15111 745 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 CDK14O94921 469 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 TNFSF15O95150 251 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 CCDC175P0C221 793 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 ZNF7P17097 686 aaPredicted RBP12.7□□□□□ -0.38
ABCF3-215ENST00000481116 TPH1P17752 444 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 MPSTP25325 297 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 CD1CP29017 333 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 TMPRSS15P98073 1019 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 CFHR1Q03591 330 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 TMEM115Q12893 351 aaPredicted RBP12.7□□□□□ -0.38
ABCF3-215ENST00000481116 NFATC2Q13469 925 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 SNX1Q13596 522 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 PEX6Q13608 980 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 NR1D2Q14995 579 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 RPS6KA1Q15418 735 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 TAF1AQ15573 450 aaPredicted RBP12.7□□□□□ -0.38
ABCF3-215ENST00000481116 INSCQ1MX18 579 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 PARP6Q2NL67 630 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 MAP9Q49MG5 647 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 IYDQ6PHW0 289 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 ZNF574Q6ZN55 896 aaPredicted RBP12.7□□□□□ -0.38
ABCF3-215ENST00000481116 RAB11FIP2Q7L804 512 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 LRRTM4Q86VH4 590 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 SLC13A5Q86YT5 568 aaPredicted RBP12.7□□□□□ -0.38
ABCF3-215ENST00000481116 SFRP1Q8N474 314 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 WDR36Q8NI36 951 aaKnown RBP12.7□□□□□ -0.38
ABCF3-215ENST00000481116 SNIP1Q8TAD8 396 aaKnown RBP12.7□□□□□ -0.38
ABCF3-215ENST00000481116 SLC46A1Q96NT5 459 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 SCHIP1Q9P0W5 487 aaPredicted RBP12.7□□□□□ -0.38
ABCF3-215ENST00000481116 FKBPLQ9UIM3 349 aa12.7□□□□□ -0.38
ABCF3-215ENST00000481116 IGHV1OR21-1A0A087WYE8 117 aa12.69□□□□□ -0.38
ABCF3-215ENST00000481116 A6NCN8 305 aa12.69□□□□□ -0.38
ABCF3-215ENST00000481116 KMOO15229 486 aa12.69□□□□□ -0.38
ABCF3-215ENST00000481116 LIASO43766 372 aa12.69□□□□□ -0.38
ABCF3-215ENST00000481116 VEGFDO43915 354 aa12.69□□□□□ -0.38
ABCF3-215ENST00000481116 DXOO77932 396 aaKnown RBP12.69□□□□□ -0.38
ABCF3-215ENST00000481116 HOXB3P14651 431 aaPredicted RBP12.69□□□□□ -0.38
ABCF3-215ENST00000481116 ETS1P14921 441 aa12.69□□□□□ -0.38
ABCF3-215ENST00000481116 ITIH1P19827 911 aa12.69□□□□□ -0.38
ABCF3-215ENST00000481116 LPOP22079 712 aaPredicted RBP12.69□□□□□ -0.38
ABCF3-215ENST00000481116 RBMS1P29558 406 aaKnown RBP12.69□□□□□ -0.38
ABCF3-215ENST00000481116 CTSCP53634 463 aa12.69□□□□□ -0.38
ABCF3-215ENST00000481116 ZFP36L1Q07352 338 aaKnown RBP12.69□□□□□ -0.38
ABCF3-215ENST00000481116 SEPT7Q16181 437 aaKnown RBP12.69□□□□□ -0.38
ABCF3-215ENST00000481116 KCTD19Q17RG1 926 aaPredicted RBP12.69□□□□□ -0.38
ABCF3-215ENST00000481116 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.69□□□□□ -0.38
ABCF3-215ENST00000481116 PHF19Q5T6S3 580 aa12.69□□□□□ -0.38
ABCF3-215ENST00000481116 KCTD11Q693B1 232 aa12.69□□□□□ -0.38
ABCF3-215ENST00000481116 PIM3Q86V86 326 aa12.69□□□□□ -0.38
ABCF3-215ENST00000481116 SLITRK4Q8IW52 837 aa12.69□□□□□ -0.38
ABCF3-215ENST00000481116 KLHDC8BQ8IXV7 354 aa12.69□□□□□ -0.38
ABCF3-215ENST00000481116 LSMEM2Q8N112 164 aa12.69□□□□□ -0.38
ABCF3-215ENST00000481116 FBXO39Q8N4B4 442 aa12.69□□□□□ -0.38
ABCF3-215ENST00000481116 RCBTB1Q8NDN9 531 aa12.69□□□□□ -0.38
ABCF3-215ENST00000481116 GRAMD1AQ96CP6 724 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms