RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 C9P02748 559 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 PYGLP06737 847 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 BPIP17213 487 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 XRCC1P18887 633 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-212ENST00000480836 NR1D1P20393 614 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 HNRNPH3P31942 346 aaKnown RBP13.11□□□□□ -0.31
PTPN7-212ENST00000480836 ADCY2Q08462 1091 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 LLGL1Q15334 1064 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 PCSK7Q16549 785 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 SLC9A4Q6AI14 798 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 MICALCLQ6ZW33 695 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 TMEM135Q86UB9 458 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 RAVER1Q8IY67 606 aaKnown RBP13.11□□□□□ -0.31
PTPN7-212ENST00000480836 RSC1A1Q92681 617 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 OLFM3Q96PB7 478 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 CHP1Q99653 195 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 DPYSL5Q9BPU6 564 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 GPN2Q9H9Y4 310 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-212ENST00000480836 ZFYVE1Q9HBF4 777 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 TRIM39Q9HCM9 518 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 BPIFA1Q9NP55 256 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 UBP1Q9NZI7 540 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 PKD2L2Q9NZM6 624 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 DNAJC16Q9Y2G8 782 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 LUC7L2Q9Y383 392 aaKnown RBP13.11□□□□□ -0.31
PTPN7-212ENST00000480836 HEY1Q9Y5J3 304 aa13.11□□□□□ -0.31
PTPN7-212ENST00000480836 MN1Q10571 1320 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-212ENST00000480836 OR52A4PA6NMU1 304 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 GOLGA6L22H0YM25 854 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 ZW10O43264 779 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 SLC25A14O95258 325 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-212ENST00000480836 TIAF1O95411 115 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 SLC4A1P02730 911 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 SFTPCP11686 197 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 RPL10P27635 214 aaKnown RBP13.1□□□□□ -0.31
PTPN7-212ENST00000480836 MAP4P27816 1152 aaKnown RBP13.1□□□□□ -0.31
PTPN7-212ENST00000480836 CD68P34810 354 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-212ENST00000480836 CCR10P46092 362 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 PPM1FP49593 454 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-212ENST00000480836 SEPHS1P49903 392 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 CLCNKAP51800 687 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 DRG2P55039 364 aaKnown RBP13.1□□□□□ -0.31
PTPN7-212ENST00000480836 CDC20Q12834 499 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 MESDQ14696 234 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 SEPT7Q16181 437 aaKnown RBP13.1□□□□□ -0.31
PTPN7-212ENST00000480836 DEFB109BQ30KR1 87 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 CERS6Q6ZMG9 384 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 TMEM26Q6ZUK4 368 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 SLC9B2Q86UD5 537 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 SLC35G2Q8TBE7 412 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 NAT14Q8WUY8 206 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 GLYATL1Q969I3 302 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 RNF25Q96BH1 459 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-212ENST00000480836 ABHD17AQ96GS6 310 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 ELMO2Q96JJ3 720 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 C9orf72Q96LT7 481 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 RUFY1Q96T51 708 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 HERPUD2Q9BSE4 406 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 SPATA16Q9BXB7 569 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 ADNPQ9H2P0 1102 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 RMI1Q9H9A7 625 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 TRIM10Q9UDY6 481 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 ZNF711Q9Y462 761 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 UBR5O95071 2799 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-212ENST00000480836 RELNP78509 3460 aa13.1□□□□□ -0.31
PTPN7-212ENST00000480836 KIR2DS5A0A0G2JLQ3 304 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 A0A0G2JNG1 304 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 LRRD1A4D1F6 860 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 RGSL1A5PLK6 1076 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 ZNF891A8MT65 544 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-212ENST00000480836 KIR2DS3K7RE56 304 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 POLR1CO15160 346 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-212ENST00000480836 ZNF7P17097 686 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-212ENST00000480836 STAT5AP42229 794 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 EPHA4P54764 986 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 RAB15P59190 212 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 AP1B1Q10567 949 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 PEX6Q13608 980 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 PTPRCAPQ14761 206 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 KIR2DS5Q14953 304 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 ATP13A5Q4VNC0 1218 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 C16orf46Q6P387 395 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 CEACAM20Q6UY09 585 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 GALNT6Q8NCL4 622 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 CCDC112Q8NEF3 446 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 STARD8Q92502 1023 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 TGM7Q96PF1 710 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 XPO4Q9C0E2 1151 aaKnown RBP13.09□□□□□ -0.31
PTPN7-212ENST00000480836 OSGEPL1Q9H4B0 414 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 MAGEE1Q9HCI5 957 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 SLC40A1Q9NP59 571 aa13.09□□□□□ -0.31
PTPN7-212ENST00000480836 LILRA5A6NI73 299 aa13.08□□□□□ -0.32
PTPN7-212ENST00000480836 CAPN5O15484 640 aaPredicted RBP13.08□□□□□ -0.32
PTPN7-212ENST00000480836 UGT1A9O60656 530 aa13.08□□□□□ -0.32
PTPN7-212ENST00000480836 PMPCBO75439 489 aa13.08□□□□□ -0.32
PTPN7-212ENST00000480836 PDGFAP04085 211 aa13.08□□□□□ -0.32
PTPN7-212ENST00000480836 KRT7P08729 469 aa13.08□□□□□ -0.32
PTPN7-212ENST00000480836 H2AFZP0C0S5 128 aa13.08□□□□□ -0.32
PTPN7-212ENST00000480836 ANKRD34CP0C6C1 535 aa13.08□□□□□ -0.32
PTPN7-212ENST00000480836 UGT1A6P19224 532 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms