RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 GPSM3Q9Y4H4 160 aa13.34□□□□□ -0.27
SNRNP200-204ENST00000480615 PCYT1BQ9Y5K3 369 aaPredicted RBP13.34□□□□□ -0.27
SNRNP200-204ENST00000480615 CABIN1Q9Y6J0 2220 aa13.34□□□□□ -0.27
SNRNP200-204ENST00000480615 SPEGQ15772 3267 aa13.33□□□□□ -0.27
SNRNP200-204ENST00000480615 FFAR2O15552 330 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 CSF2P04141 144 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 CELA2BP08218 269 aaPredicted RBP13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 TEAD1P28347 426 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 HK3P52790 923 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 CAV1Q03135 178 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 CACNG1Q06432 222 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 SHBQ15464 509 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 ZNF423Q2M1K9 1284 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 PLA2G4EQ3MJ16 856 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 ANKRD20A4Q4UJ75 823 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 PDPK2PQ6A1A2 396 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 AFTPHQ6ULP2 937 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 CRTC3Q6UUV7 619 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 CAPN12Q6ZSI9 719 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 SNX20Q7Z614 316 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 ZBED8Q8IZ13 594 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 UNC5BQ8IZJ1 945 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 OR4L1Q8NH43 312 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 LMX1AQ8TE12 382 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 TTC25Q96NG3 672 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 VPS35Q96QK1 796 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 FMO2Q99518 471 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 ERVMER34-1Q9H9K5 563 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 SAYSD1Q9NPB0 183 aa13.33□□□□□ -0.28
SNRNP200-204ENST00000480615 A0A1B0GTQ1 180 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 FAM237BA0A1B0GVD1 139 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 OR2AG2A6NM03 316 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 H7C0S8 307 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 CDK14O94921 469 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 F7P08709 466 aaPredicted RBP13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 HOXC4P09017 264 aaPredicted RBP13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 MYBL2P10244 700 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 CTSEP14091 401 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 NME1P15531 152 aaKnown RBP13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 ZNF8P17098 575 aaPredicted RBP13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 MSH3P20585 1137 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 CCT8P50990 548 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 ACVR1Q04771 509 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 TMEM115Q12893 351 aaPredicted RBP13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 FASTKD1Q53R41 847 aaKnown RBP13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 STPG1Q5TH74 334 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 ADGRG6Q86SQ4 1221 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 SERPINA9Q86WD7 417 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 NXPE1Q8N323 547 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 GPR161Q8N6U8 529 aaKnown RBP13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 EBNA1BP2Q99848 306 aaKnown RBP13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 WDR83Q9BRX9 315 aaKnown RBP13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 LRRC61Q9BV99 259 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 TMEM168Q9H0V1 697 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 MRM3Q9HC36 420 aaKnown RBP13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 TRIM39Q9HCM9 518 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 CATSPERZQ9NTU4 200 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 MARCH4Q9P2E8 410 aaPredicted RBP13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 MTRF1LQ9UGC7 380 aaKnown RBP13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 ZC3H7BQ9UGR2 993 aaKnown RBP13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 SLC17A4Q9Y2C5 497 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 PLEKHM1Q9Y4G2 1056 aa13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 ASCC3Q8N3C0 2202 aaKnown RBP13.32□□□□□ -0.28
SNRNP200-204ENST00000480615 MAGEB16A2A368 324 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 H3BM21 787 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 TNFP01375 233 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 POLBP06746 335 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 PGAM1P18669 254 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 PAMP19021 973 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 DGKAP23743 735 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 ARNTP27540 789 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 EPHA8P29322 1005 aaPredicted RBP13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 FOXN2P32314 431 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 HNRNPKP61978 463 aaKnown RBP eCLIP13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 VSNL1P62760 191 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 TUBB4BP68371 445 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 SEMA3AQ14563 771 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 CRYMQ14894 314 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 LDLRAP1Q5SW96 308 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 CENPUQ71F23 418 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 CHST15Q7LFX5 561 aaPredicted RBP13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 GALNT13Q8IUC8 556 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 TRAPPC5Q8IUR0 188 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 OXR1Q8N573 874 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 FBXO36Q8NEA4 188 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 ZNF548Q8NEK5 533 aaPredicted RBP13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 DDHD1Q8NEL9 900 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 CCL4L1Q8NHW4 92 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 BOCQ9BWV1 1114 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 FAM129AQ9BZQ8 928 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 PPANQ9NQ55 473 aaKnown RBP13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 C20orf96Q9NUD7 363 aaPredicted RBP13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 FAM8A1Q9UBU6 413 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 RIMKLBQ9ULI2 386 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 TEX264Q9Y6I9 313 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 ZCWPW2A0A1B0GU75 182 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 TNFRSF10CO14798 259 aa13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 CD3EAPO15446 510 aaKnown RBP13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 FOXD2O60548 495 aaPredicted RBP13.31□□□□□ -0.28
SNRNP200-204ENST00000480615 DNAJC6O75061 913 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms