RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 MBNL1Q9NR56 388 aaKnown RBP17.41■□□□□ 0.38
UPF3A-206ENST00000480362 WSB2Q9NYS7 404 aaPredicted RBP17.41■□□□□ 0.38
UPF3A-206ENST00000480362 CNOT6Q9ULM6 557 aaKnown RBP17.41■□□□□ 0.38
UPF3A-206ENST00000480362 PRSS21Q9Y6M0 314 aa17.41■□□□□ 0.38
UPF3A-206ENST00000480362 TRPM6Q9BX84 2022 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 IGLV3-16A0A075B6K0 115 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 SLC31A1O15431 190 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 RHOBTB1O94844 696 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 SLC25A14O95258 325 aaPredicted RBP17.4■□□□□ 0.38
UPF3A-206ENST00000480362 ESR1P03372 595 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 MPOP05164 745 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 PYGLP06737 847 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 AOC1P19801 751 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 CD6P30203 668 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 AKT1P31749 480 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 CCNFP41002 786 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 CCR3P51677 355 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 CDKN2DP55273 166 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 B4GALNT1Q00973 533 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 IRF4Q15306 451 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 PPM1JQ5JR12 505 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 LDLRAP1Q5SW96 308 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 ZNF648Q5T619 568 aaPredicted RBP17.4■□□□□ 0.38
UPF3A-206ENST00000480362 TRIM69Q86WT6 500 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 KRT222Q8N1A0 295 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 CLDN19Q8N6F1 224 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 FRMD1Q8N878 549 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 NAT14Q8WUY8 206 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 RLN3Q8WXF3 142 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 CENPTQ96BT3 561 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 ALKBH8Q96BT7 664 aaKnown RBP17.4■□□□□ 0.38
UPF3A-206ENST00000480362 TSPAN17Q96FV3 270 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 DCUN1D1Q96GG9 259 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 C1QTNF7Q9BXJ2 289 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 VPS11Q9H270 941 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 KCNK9Q9NPC2 374 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 PCMTD2Q9NV79 361 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 OGFRQ9NZT2 677 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 PCDHB1Q9Y5F3 818 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 COMMD10Q9Y6G5 202 aa17.4■□□□□ 0.38
UPF3A-206ENST00000480362 A0A096LPK6 155 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 TMEM221A6NGB7 291 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 K7ESF4 209 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 M0R296 226 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 RAD51BO15315 384 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 PHGDHO43175 533 aaKnown RBP17.39■□□□□ 0.37
UPF3A-206ENST00000480362 MTX2O75431 263 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 C2P06681 752 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 NR1D1P20393 614 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 MSH3P20585 1137 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 FDXRP22570 491 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 CRABP2P29373 138 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 CSRP3P50461 194 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 RAB10P61026 200 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 PPP2R2AP63151 447 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 TIAL1Q01085 375 aaKnown RBP eCLIP17.39■□□□□ 0.37
UPF3A-206ENST00000480362 PPARDQ03181 441 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 PDE1CQ14123 709 aaPredicted RBP17.39■□□□□ 0.37
UPF3A-206ENST00000480362 ZKSCAN8Q15776 578 aaPredicted RBP17.39■□□□□ 0.37
UPF3A-206ENST00000480362 KHDC1Q4VXA5 237 aaKnown RBP17.39■□□□□ 0.37
UPF3A-206ENST00000480362 PTRHD1Q6GMV3 140 aaKnown RBP17.39■□□□□ 0.37
UPF3A-206ENST00000480362 ADAMTSL4Q6UY14 1074 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 MAMSTRQ6ZN01 415 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 RAPH1Q70E73 1250 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 PHYKPLQ8IUZ5 450 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 BANPQ8N9N5 519 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 HEXDCQ8WVB3 486 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 CABS1Q96KC9 395 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 LENG8Q96PV6 779 aaPredicted RBP17.39■□□□□ 0.37
UPF3A-206ENST00000480362 SELENOSQ9BQE4 189 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 SLC13A1Q9BZW2 595 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 C6orf106Q9H6K1 298 aaPredicted RBP17.39■□□□□ 0.37
UPF3A-206ENST00000480362 GNPTGQ9UJJ9 305 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 TLK1Q9UKI8 766 aa17.39■□□□□ 0.37
UPF3A-206ENST00000480362 NUMA1Q14980 2115 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 IGHV1OR15-9A0A0B4J2B8 117 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 IQCF5A8MTL0 148 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 CFAP99D6REC4 459 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 NIPSNAP2O75323 286 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 RALBP11234 206 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 ATP1B2P14415 290 aaPredicted RBP17.38■□□□□ 0.37
UPF3A-206ENST00000480362 GMPRP36959 345 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 ZNF460Q14592 562 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 INPP5AQ14642 412 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 KIAA0895LQ68EN5 471 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 MACC1Q6ZN28 852 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 TRIM74Q86UV6 250 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 SPNS2Q8IVW8 549 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 FAM160A2Q8N612 972 aaPredicted RBP17.38■□□□□ 0.37
UPF3A-206ENST00000480362 HIC2Q96JB3 615 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 GPR174Q9BXC1 333 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 SSU72Q9NP77 194 aaKnown RBP17.38■□□□□ 0.37
UPF3A-206ENST00000480362 FZD3Q9NPG1 666 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 SPATA6Q9NWH7 488 aaPredicted RBP17.38■□□□□ 0.37
UPF3A-206ENST00000480362 MED16Q9Y2X0 877 aa17.38■□□□□ 0.37
UPF3A-206ENST00000480362 COL6A3P12111 3177 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 TMEM120BA0PK00 339 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 C10orf142B7Z368 130 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 H3BMM5 538 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 COPEO14579 308 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms