RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 RHOT1Q8IXI2 618 aa17.08■□□□□ 0.32
HMGN1-212ENST00000479586 SLC34A3Q8N130 599 aa17.08■□□□□ 0.32
HMGN1-212ENST00000479586 SNRNP25Q9BV90 132 aaKnown RBP17.08■□□□□ 0.32
HMGN1-212ENST00000479586 OSGEPL1Q9H4B0 414 aa17.08■□□□□ 0.32
HMGN1-212ENST00000479586 POLEQ07864 2286 aa17.08■□□□□ 0.32
HMGN1-212ENST00000479586 HIVEP1P15822 2718 aa17.07■□□□□ 0.32
HMGN1-212ENST00000479586 A6NL46 340 aa17.07■□□□□ 0.32
HMGN1-212ENST00000479586 VIPP01282 170 aa17.07■□□□□ 0.32
HMGN1-212ENST00000479586 FOLR1P15328 257 aa17.07■□□□□ 0.32
HMGN1-212ENST00000479586 XRCC1P18887 633 aaPredicted RBP17.07■□□□□ 0.32
HMGN1-212ENST00000479586 SOX5P35711 763 aa17.07■□□□□ 0.32
HMGN1-212ENST00000479586 SLC19A1P41440 591 aa17.07■□□□□ 0.32
HMGN1-212ENST00000479586 CAPZBP47756 277 aa17.07■□□□□ 0.32
HMGN1-212ENST00000479586 PPP1CAP62136 330 aa17.07■□□□□ 0.32
HMGN1-212ENST00000479586 PPP6R3Q5H9R7 873 aaPredicted RBP17.07■□□□□ 0.32
HMGN1-212ENST00000479586 TRIM48Q8IWZ4 208 aa17.07■□□□□ 0.32
HMGN1-212ENST00000479586 WDR24Q96S15 920 aa17.07■□□□□ 0.32
HMGN1-212ENST00000479586 PDE7BQ9NP56 450 aa17.07■□□□□ 0.32
HMGN1-212ENST00000479586 ZNF624Q9P2J8 865 aaPredicted RBP17.07■□□□□ 0.32
HMGN1-212ENST00000479586 PCSK1NQ9UHG2 260 aa17.07■□□□□ 0.32
HMGN1-212ENST00000479586 RARRES3Q9UL19 164 aa17.07■□□□□ 0.32
HMGN1-212ENST00000479586 FARSAQ9Y285 508 aaKnown RBP17.07■□□□□ 0.32
HMGN1-212ENST00000479586 SIK3Q9Y2K2 1263 aa17.07■□□□□ 0.32
HMGN1-212ENST00000479586 ANKUB1A6NFN9 424 aa17.06■□□□□ 0.32
HMGN1-212ENST00000479586 FADS2P1A8MWK0 482 aa17.06■□□□□ 0.32
HMGN1-212ENST00000479586 ZNF185O15231 689 aa17.06■□□□□ 0.32
HMGN1-212ENST00000479586 HNRNPRO43390 633 aaKnown RBP17.06■□□□□ 0.32
HMGN1-212ENST00000479586 GRID2O43424 1007 aa17.06■□□□□ 0.32
HMGN1-212ENST00000479586 FZD6O60353 706 aa17.06■□□□□ 0.32
HMGN1-212ENST00000479586 ZNF30P17039 623 aa17.06■□□□□ 0.32
HMGN1-212ENST00000479586 LPOP22079 712 aaPredicted RBP17.06■□□□□ 0.32
HMGN1-212ENST00000479586 KLK7P49862 253 aa17.06■□□□□ 0.32
HMGN1-212ENST00000479586 PLEKHN1Q494U1 663 aaPredicted RBP17.06■□□□□ 0.32
HMGN1-212ENST00000479586 ERMARDQ5T6L9 678 aa17.06■□□□□ 0.32
HMGN1-212ENST00000479586 IRGCQ6NXR0 463 aa17.06■□□□□ 0.32
HMGN1-212ENST00000479586 CISD2Q8N5K1 135 aaKnown RBP17.06■□□□□ 0.32
HMGN1-212ENST00000479586 ARFGAP1Q8N6T3 406 aa17.06■□□□□ 0.32
HMGN1-212ENST00000479586 ADAMTS17Q8TE56 1095 aa17.06■□□□□ 0.32
HMGN1-212ENST00000479586 UNKQ9C0B0 810 aaKnown RBP17.06■□□□□ 0.32
HMGN1-212ENST00000479586 RMI1Q9H9A7 625 aa17.06■□□□□ 0.32
HMGN1-212ENST00000479586 ARFGAP3Q9NP61 516 aa17.06■□□□□ 0.32
HMGN1-212ENST00000479586 KLC4Q9NSK0 619 aa17.06■□□□□ 0.32
HMGN1-212ENST00000479586 A0A0J9YYE9 177 aa17.05■□□□□ 0.32
HMGN1-212ENST00000479586 EIF3CLB5ME19 914 aaKnown RBP17.05■□□□□ 0.32
HMGN1-212ENST00000479586 NUAK1O60285 661 aa17.05■□□□□ 0.32
HMGN1-212ENST00000479586 TRBC1P01850 177 aa17.05■□□□□ 0.32
HMGN1-212ENST00000479586 ITGA1P56199 1179 aa17.05■□□□□ 0.32
HMGN1-212ENST00000479586 JAM2P57087 298 aa17.05■□□□□ 0.32
HMGN1-212ENST00000479586 POLR2FP61218 127 aaKnown RBP17.05■□□□□ 0.32
HMGN1-212ENST00000479586 RAPSNQ13702 412 aa17.05■□□□□ 0.32
HMGN1-212ENST00000479586 DPYSQ14117 519 aa17.05■□□□□ 0.32
HMGN1-212ENST00000479586 NAA30Q147X3 362 aaPredicted RBP17.05■□□□□ 0.32
HMGN1-212ENST00000479586 SEPT7Q16181 437 aaKnown RBP17.05■□□□□ 0.32
HMGN1-212ENST00000479586 ZNF648Q5T619 568 aaPredicted RBP17.05■□□□□ 0.32
HMGN1-212ENST00000479586 FAM69BQ5VUD6 431 aa17.05■□□□□ 0.32
HMGN1-212ENST00000479586 CYB5D1Q6P9G0 228 aa17.05■□□□□ 0.32
HMGN1-212ENST00000479586 DCUN1D2Q6PH85 259 aa17.05■□□□□ 0.32
HMGN1-212ENST00000479586 CYP4V2Q6ZWL3 525 aaPredicted RBP17.05■□□□□ 0.32
HMGN1-212ENST00000479586 HPS6Q86YV9 775 aa17.05■□□□□ 0.32
HMGN1-212ENST00000479586 IQCKQ8N0W5 287 aa17.05■□□□□ 0.32
HMGN1-212ENST00000479586 AOPEPQ8N6M6 819 aa17.05■□□□□ 0.32
HMGN1-212ENST00000479586 EIF3CQ99613 913 aaKnown RBP17.05■□□□□ 0.32
HMGN1-212ENST00000479586 NLRC4Q9NPP4 1024 aa17.05■□□□□ 0.32
HMGN1-212ENST00000479586 FAM207AQ9NSI2 230 aaPredicted RBP17.05■□□□□ 0.32
HMGN1-212ENST00000479586 SEPT11Q9NVA2 429 aaKnown RBP17.05■□□□□ 0.32
HMGN1-212ENST00000479586 CWC15Q9P013 229 aaKnown RBP17.05■□□□□ 0.32
HMGN1-212ENST00000479586 ATXN10Q9UBB4 475 aa17.05■□□□□ 0.32
HMGN1-212ENST00000479586 ADGRG1Q9Y653 693 aa17.05■□□□□ 0.32
HMGN1-212ENST00000479586 IGHV5-51A0A0C4DH38 117 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 SSU72P8A0A1W2PR75 194 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 EPHB6O15197 1021 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 MAFKO60675 156 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 GADD45BO75293 160 aaPredicted RBP17.04■□□□□ 0.32
HMGN1-212ENST00000479586 TMEM63AO94886 807 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 CLDN7O95471 211 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 EBLN1P0CF75 366 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 ZNF8P17098 575 aaPredicted RBP17.04■□□□□ 0.32
HMGN1-212ENST00000479586 MMP13P45452 471 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 CLCNKAP51800 687 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 CDK18Q07002 472 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 GPR18Q14330 331 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 PLA2G4EQ3MJ16 856 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 RALGPS1Q5JS13 557 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 HENMT1Q5T8I9 393 aaKnown RBP17.04■□□□□ 0.32
HMGN1-212ENST00000479586 CRTC3Q6UUV7 619 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 CERS6Q6ZMG9 384 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 NDUFAF2Q8N183 169 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 BBS5Q8N3I7 341 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 SIDT2Q8NBJ9 832 aaKnown RBP17.04■□□□□ 0.32
HMGN1-212ENST00000479586 MR1Q95460 341 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 ZDHHC12Q96GR4 267 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 SLC41A2Q96JW4 573 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 FCRL4Q96PJ5 515 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 CARD9Q9H257 536 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 ETNK2Q9NVF9 386 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 GPR83Q9NYM4 423 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 SLC23A2Q9UGH3 650 aa17.04■□□□□ 0.32
HMGN1-212ENST00000479586 G3BP2Q9UN86 482 aaKnown RBP17.04■□□□□ 0.32
HMGN1-212ENST00000479586 DESP17661 470 aa17.03■□□□□ 0.32
HMGN1-212ENST00000479586 PSMA2P25787 234 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms