RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 PKD2L2Q9NZM6 624 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 RARRES3Q9UL19 164 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 FADS2P1A8MWK0 482 aa15.85■□□□□ 0.13
DDX56-210ENST00000479440 GPR89AB7ZAQ6 455 aa15.85■□□□□ 0.13
DDX56-210ENST00000479440 CCDC172P0C7W6 258 aa15.85■□□□□ 0.13
DDX56-210ENST00000479440 GPR89BP0CG08 455 aa15.85■□□□□ 0.13
DDX56-210ENST00000479440 CCL11P51671 97 aa15.85■□□□□ 0.13
DDX56-210ENST00000479440 RPS18P62269 152 aaKnown RBP15.85■□□□□ 0.13
DDX56-210ENST00000479440 ITKQ08881 620 aa15.85■□□□□ 0.13
DDX56-210ENST00000479440 INSCQ1MX18 579 aa15.85■□□□□ 0.13
DDX56-210ENST00000479440 PRR30Q53SZ7 412 aaPredicted RBP15.85■□□□□ 0.13
DDX56-210ENST00000479440 JMJD6Q6NYC1 403 aaPredicted RBP15.85■□□□□ 0.13
DDX56-210ENST00000479440 FAM92BQ6ZTR7 304 aa15.85■□□□□ 0.13
DDX56-210ENST00000479440 CYP4V2Q6ZWL3 525 aaPredicted RBP15.85■□□□□ 0.13
DDX56-210ENST00000479440 ARFGAP1Q8N6T3 406 aa15.85■□□□□ 0.13
DDX56-210ENST00000479440 RSC1A1Q92681 617 aa15.85■□□□□ 0.13
DDX56-210ENST00000479440 TDRD1Q9BXT4 1180 aaKnown RBP15.85■□□□□ 0.13
DDX56-210ENST00000479440 KLC4Q9NSK0 619 aa15.85■□□□□ 0.13
DDX56-210ENST00000479440 CNOT6Q9ULM6 557 aaKnown RBP15.85■□□□□ 0.13
DDX56-210ENST00000479440 SIK3Q9Y2K2 1263 aa15.85■□□□□ 0.13
DDX56-210ENST00000479440 SLC30A1Q9Y6M5 507 aa15.85■□□□□ 0.13
DDX56-210ENST00000479440 C1orf232A0A0U1RR37 186 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 PDZK1P1A8MUH7 402 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 ATMINO43313 823 aaPredicted RBP15.84■□□□□ 0.13
DDX56-210ENST00000479440 TIAF1O95411 115 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 CLDN7O95471 211 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 LDLRP01130 860 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 NELFEP18615 380 aaKnown RBP15.84■□□□□ 0.13
DDX56-210ENST00000479440 SPINT3P49223 89 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 ACY1Q03154 408 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 IL10RAQ13651 578 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 KRT31Q15323 416 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 DPYSL2Q16555 572 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 CT47A1Q5JQC4 288 aaPredicted RBP15.84■□□□□ 0.13
DDX56-210ENST00000479440 ZNF569Q5MCW4 686 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 PLEKHA7Q6IQ23 1121 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 IRGCQ6NXR0 463 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 BPHLQ86WA6 291 aaPredicted RBP15.84■□□□□ 0.13
DDX56-210ENST00000479440 RHOT1Q8IXI2 618 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 TEX26Q8N6G2 289 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 SIDT2Q8NBJ9 832 aaKnown RBP15.84■□□□□ 0.13
DDX56-210ENST00000479440 LPCAT1Q8NF37 534 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 CCHCR1Q8TD31 782 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 UBXN4Q92575 508 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 SMIM14Q96QK8 99 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 LYSMD1Q96S90 227 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 FAM83DQ9H4H8 585 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 ATXN10Q9UBB4 475 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 EPHA6Q9UF33 1036 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 CREBBPQ92793 2442 aa15.84■□□□□ 0.13
DDX56-210ENST00000479440 RGSL1A5PLK6 1076 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 WIPF3A6NGB9 483 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 KIF1CO43896 1103 aaKnown RBP15.83■□□□□ 0.12
DDX56-210ENST00000479440 CPNE3O75131 537 aaKnown RBP15.83■□□□□ 0.12
DDX56-210ENST00000479440 ZNF8P17098 575 aaPredicted RBP15.83■□□□□ 0.12
DDX56-210ENST00000479440 ELAVL4P26378 380 aaKnown RBP15.83■□□□□ 0.12
DDX56-210ENST00000479440 SLC19A1P41440 591 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 RPL26P61254 145 aaKnown RBP15.83■□□□□ 0.12
DDX56-210ENST00000479440 SEPT7Q16181 437 aaKnown RBP15.83■□□□□ 0.12
DDX56-210ENST00000479440 PLA2G4EQ3MJ16 856 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 TDRD12Q587J7 1177 aaKnown RBP15.83■□□□□ 0.12
DDX56-210ENST00000479440 SLC6A19Q695T7 634 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 ALG1LQ6GMV1 187 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 PWWP2BQ6NUJ5 590 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 LRRC49Q8IUZ0 686 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 Q8NA96 180 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 PNPLA2Q96AD5 504 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 CXorf40BQ96DE9 158 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 C5orf34Q96MH7 638 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 CSPG4P5Q96PW8 444 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 WDR24Q96S15 920 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 RUFY1Q96T51 708 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 RAB33BQ9H082 229 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.83■□□□□ 0.12
DDX56-210ENST00000479440 ETNK2Q9NVF9 386 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 SCHIP1Q9P0W5 487 aaPredicted RBP15.83■□□□□ 0.12
DDX56-210ENST00000479440 LUZP4Q9P127 313 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 ERRFI1Q9UJM3 462 aaPredicted RBP15.83■□□□□ 0.12
DDX56-210ENST00000479440 RPL26L1Q9UNX3 145 aaKnown RBP15.83■□□□□ 0.12
DDX56-210ENST00000479440 CHKBQ9Y259 395 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 SLC5A6Q9Y289 635 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 ADGRG1Q9Y653 693 aa15.83■□□□□ 0.12
DDX56-210ENST00000479440 TNRC6AQ8NDV7 1962 aaKnown RBP15.82■□□□□ 0.12
DDX56-210ENST00000479440 SSU72P8A0A1W2PR75 194 aa15.82■□□□□ 0.12
DDX56-210ENST00000479440 TMEM191CA6NGB0 347 aa15.82■□□□□ 0.12
DDX56-210ENST00000479440 CEACAM4O75871 244 aa15.82■□□□□ 0.12
DDX56-210ENST00000479440 FERP16591 822 aa15.82■□□□□ 0.12
DDX56-210ENST00000479440 LPOP22079 712 aaPredicted RBP15.82■□□□□ 0.12
DDX56-210ENST00000479440 AMPD1P23109 780 aa15.82■□□□□ 0.12
DDX56-210ENST00000479440 CES1P23141 567 aa15.82■□□□□ 0.12
DDX56-210ENST00000479440 PCK1P35558 622 aa15.82■□□□□ 0.12
DDX56-210ENST00000479440 PTGIRP43119 386 aa15.82■□□□□ 0.12
DDX56-210ENST00000479440 SMTNL2Q2TAL5 461 aa15.82■□□□□ 0.12
DDX56-210ENST00000479440 ANKRD20A8PQ5CZ79 823 aa15.82■□□□□ 0.12
DDX56-210ENST00000479440 CRTC3Q6UUV7 619 aa15.82■□□□□ 0.12
DDX56-210ENST00000479440 POLNQ7Z5Q5 900 aa15.82■□□□□ 0.12
DDX56-210ENST00000479440 LRRTM4Q86VH4 590 aa15.82■□□□□ 0.12
DDX56-210ENST00000479440 TCTN2Q96GX1 697 aa15.82■□□□□ 0.12
DDX56-210ENST00000479440 SLC41A2Q96JW4 573 aa15.82■□□□□ 0.12
DDX56-210ENST00000479440 TIMM29Q9BSF4 260 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms