RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 NFE2L3Q9Y4A8 694 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 SPACA6W5XKT8 324 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 PLA2R1Q13018 1463 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 TCOF1Q13428 1488 aaKnown RBP3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 MBD5Q9P267 1494 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 PTPRTO14522 1441 aa3.53□□□□□ -1.85
FNDC3B-209ENST00000478016 PTPRKQ15262 1439 aa3.53□□□□□ -1.85
FNDC3B-209ENST00000478016 KIAA1107Q9UPP5 1409 aa3.53□□□□□ -1.85
FNDC3B-209ENST00000478016 ADCY9O60503 1353 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 DISP3Q9P2K9 1392 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 MROH1Q8NDA8 1641 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 XDHP47989 1333 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 MYBBP1AQ9BQG0 1328 aaKnown RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 ZNF644Q9H582 1327 aaPredicted RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 ARHGEF5Q12774 1597 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 FAM230AA0A1W2PPH8 454 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 GSAPA4D1B5 854 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 GOLGA8IPA6NC78 632 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 PTGES3LE9PB15 166 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 ZNF197O14709 1029 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 TSPAN4O14817 238 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 SLC30A4O14863 429 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 LIN7AO14910 233 aaPredicted RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 XPO1O14980 1071 aaKnown RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 TLX2O43763 284 aaPredicted RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 GMFGO60234 142 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 DTNBO60941 627 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 ECI2O75521 394 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 RPP40O75818 363 aaKnown RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 VNN2O95498 520 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 C22orf31O95567 290 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 DIRAS3O95661 229 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 ONECUT2O95948 504 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 CHEK2O96017 543 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 CSTAP01040 98 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 PDGFBP01127 241 aaPredicted RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 IFNA14P01570 189 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 TK1P04183 234 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 AMY1AP04745 511 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 IL6P05231 212 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 FHP07954 510 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 CYC1P08574 325 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 RPS17P08708 135 aaKnown RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 SNRPAP09012 282 aaKnown RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 CLTAP09496 248 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 CNPP09543 421 aaKnown RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 SUPT20HL2P0C7V6 817 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 ODC1P11926 461 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 INSRRP14616 1297 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 PRKACAP17612 351 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 VCLP18206 1134 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 DDCP20711 480 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 FPR1P21462 350 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 EDNRBP24530 442 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 PTPN3P26045 913 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 ABCD3P28288 659 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 CRABP2P29373 138 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 SLC7A1P30825 629 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 ALDH1A3P47895 512 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 SLC11A2P49281 568 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 ALDH7A1P49419 539 aaKnown RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 HSD17B4P51659 736 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 HNRNPMP52272 730 aaKnown RBP eCLIP3.52□□□□□ -1.852e-7■■■□□ 18.2
FNDC3B-209ENST00000478016 RPS8P62241 208 aaKnown RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 SULT2A1Q06520 285 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 ABRQ12979 859 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 DYNC1I2Q13409 638 aaKnown RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 DRP2Q13474 957 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 MTM1Q13496 603 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 CUL3Q13618 768 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 VEPH1Q14D04 833 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 FAM187BQ17R55 369 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 FAM83EQ2M2I3 478 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 ZXDCQ2QGD7 858 aaPredicted RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 PGS1Q32NB8 556 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 ZNF829Q3KNS6 432 aaPredicted RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 C3orf36Q3SXR2 165 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 TMEM119Q4V9L6 283 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 C10orf120Q5SQS8 335 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 CEP85LQ5SZL2 805 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 TEX35Q5T0J7 233 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 TTC22Q5TAA0 569 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 NAA35Q5VZE5 725 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 SPECC1LQ69YQ0 1117 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 ETFRF1Q6IPR1 90 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 DPY19L2P1Q6NXN4 242 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 FOXR2Q6PJQ5 311 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 BLOC1S2Q6QNY1 142 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 SUSD1Q6UWL2 747 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 ISLR2Q6UXK2 745 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 SYT10Q6XYQ8 523 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 ZNF852Q6ZMS4 543 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 COLCA1Q6ZS62 124 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 SLC24A5Q71RS6 500 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 H1FNTQ75WM6 255 aaPredicted RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 TRMT10CQ7L0Y3 403 aaKnown RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 PLPPR4Q7Z2D5 763 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 DDIASQ8IXT1 998 aa3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 DIS3L2Q8IYB7 885 aaKnown RBP3.52□□□□□ -1.85
FNDC3B-209ENST00000478016 C10orf67Q8IYJ2 551 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms