RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	ANKRD20A3	Q5VUR7	823 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	AADACL2	Q6P093	401 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	IYD	Q6PHW0	289 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	TMPRSS9	Q7Z410	1059 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	ADGRG6	Q86SQ4	1221 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	SLC9B2	Q86UD5	537 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	JAML	Q86YT9	394 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	SLITRK4	Q8IW52	837 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	TTC30B	Q8N4P2	665 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	TTC13	Q8NBP0	860 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	SLC37A2	Q8TED4	501 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	VPS35	Q96QK1	796 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	SLC38A3	Q99624	504 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	DPYSL5	Q9BPU6	564 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	NUDT22	Q9BRQ3	303 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	DESI2	Q9BSY9	194 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	SEMA6C	Q9H3T2	930 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	PRORY	Q9H606	182 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	STN1	Q9H668	368 aa	Known RBP	13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	AKAP7	Q9P0M2	348 aa	Predicted RBP	13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	IL17C	Q9P0M4	197 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	TBC1D29	Q9UFV1	150 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	PISD	Q9UG56	409 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	AAR2	Q9Y312	384 aa	Known RBP	13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	PKP3	Q9Y446	797 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	LOXL2	Q9Y4K0	774 aa		13.64	□□□□□ -0.23
HDAC7-222	ENST00000477937	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	IGHV1OR21-1	A0A087WYE8	117 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	OR5K4	A6NMS3	321 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	CHUK	O15111	745 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	SNX2	O60749	519 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	PPFIA2	O75334	1257 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	EML2	O95834	649 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	AGT	P01019	485 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	F3	P13726	295 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	HGF	P14210	728 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	SLC5A2	P31639	672 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	SPAM1	P38567	509 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	PPM1F	P49593	454 aa	Predicted RBP	13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	CLCNKA	P51800	687 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	HHEX	Q03014	270 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	INSC	Q1MX18	579 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	ATP13A5	Q4VNC0	1218 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	LRRTM4	Q86VH4	590 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	AVL9	Q8NBF6	648 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	OR4D9	Q8NGE8	314 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	GDAP1	Q8TB36	358 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	DTX3L	Q8TDB6	740 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	BRSK1	Q8TDC3	778 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	SH3KBP1	Q96B97	665 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	AHCYL2	Q96HN2	611 aa	Known RBP	13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	TTC25	Q96NG3	672 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	FCRL3	Q96P31	734 aa	Predicted RBP	13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	PPP1R2P1	Q96PQ5	205 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	FAM118B	Q9BPY3	351 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	FICD	Q9BVA6	458 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	OSGEPL1	Q9H4B0	414 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	IL26	Q9NPH9	171 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	KLC4	Q9NSK0	619 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	TRIM10	Q9UDY6	481 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	PCDHGA7	Q9Y5G6	932 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	ADGRG1	Q9Y653	693 aa		13.63	□□□□□ -0.23
HDAC7-222	ENST00000477937	KIR2DS5	A0A0G2JLQ3	304 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937		A0A0G2JNG1	304 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	IGHV5-10-1	A0A0J9YXX1	117 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	KIR2DS3	K7RE56	304 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	AGRP	O00253	132 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	HGS	O14964	777 aa	Predicted RBP	13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	NVL	O15381	856 aa	Known RBP	13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	MTX2	O75431	263 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	FTCD	O95954	541 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	ZNF7	P17097	686 aa	Predicted RBP	13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	PSMB4	P28070	264 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	LIMK2	P53671	638 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	TMPRSS3	P57727	454 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	CXADR	P78310	365 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	TMEM115	Q12893	351 aa	Predicted RBP	13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	TRA2A	Q13595	282 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	ITGA9	Q13797	1035 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	GTF2H3	Q13889	308 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	KIR2DS5	Q14953	304 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	NKAIN2	Q5VXU1	208 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	CRTC3	Q6UUV7	619 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	RANBP10	Q6VN20	620 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	ZNF574	Q6ZN55	896 aa	Predicted RBP	13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	ZNF761	Q86XN6	746 aa	Predicted RBP	13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	RNF10	Q8N5U6	811 aa	Known RBP	13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	OR10G6	Q8NH81	332 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	CCDC110	Q8TBZ0	833 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	LRRC45	Q96CN5	670 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	GORASP1	Q9BQQ3	440 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	ZMYND15	Q9H091	742 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	SARS2	Q9NP81	518 aa	Known RBP	13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	PRDM8	Q9NQV8	689 aa		13.62	□□□□□ -0.23
HDAC7-222	ENST00000477937	PTPRQ	Q9UMZ3	2332 aa		13.61	□□□□□ -0.23
HDAC7-222	ENST00000477937	GLYATL1P3	A0A0U1RQE8	302 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms