RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 AXIN1O15169 862 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 GJB3O75712 270 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 IMPDH1P20839 514 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 DGKQP52824 942 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 LSM3P62310 102 aaKnown RBP10.94□□□□□ -0.66
COL27A1-204ENST00000477421 TMEM214Q6NUQ4 689 aaKnown RBP10.94□□□□□ -0.66
COL27A1-204ENST00000477421 CYP4V2Q6ZWL3 525 aaPredicted RBP10.94□□□□□ -0.66
COL27A1-204ENST00000477421 UTP15Q8TED0 518 aaKnown RBP10.94□□□□□ -0.66
COL27A1-204ENST00000477421 EEF1AKMT1Q8WVE0 214 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 PKP2Q99959 881 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 TMEM30AQ9NV96 361 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 RNF186Q9NXI6 227 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 EURLQ9NYK6 297 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 Q9Y3F1 56 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 COL5A3P25940 1745 aaPredicted RBP10.94□□□□□ -0.66
COL27A1-204ENST00000477421 GLYATL1P3A0A0U1RQE8 302 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 SNNO75324 88 aaPredicted RBP10.94□□□□□ -0.66
COL27A1-204ENST00000477421 VPS4BO75351 444 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 ECI2O75521 394 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 PCDH8O95206 1070 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 KCNH1O95259 989 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 CXCL14O95715 111 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 ACRP10323 421 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 MAPKAPK2P49137 400 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 POLR2JP52435 117 aaKnown RBP10.94□□□□□ -0.66
COL27A1-204ENST00000477421 STEAP4Q687X5 459 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 GLYATQ6IB77 296 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 RRM2BQ7LG56 351 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 DNAJB7Q7Z6W7 309 aaPredicted RBP10.94□□□□□ -0.66
COL27A1-204ENST00000477421 YAF2Q8IY57 180 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 ANKRD49Q8WVL7 239 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 TCF12Q99081 682 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 SH3GL1Q99961 368 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 CAPN10Q9HC96 672 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 SPG21Q9NZD8 308 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 ZNF490Q9ULM2 529 aaPredicted RBP10.94□□□□□ -0.66
COL27A1-204ENST00000477421 RBM47A0AV96 593 aaKnown RBP10.94□□□□□ -0.66
COL27A1-204ENST00000477421 CCL16O15467 120 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 ZBTB11O95625 1053 aaPredicted RBP10.94□□□□□ -0.66
COL27A1-204ENST00000477421 COX7A2P14406 83 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 ARSAP15289 507 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 CDH2P19022 906 aaPredicted RBP10.94□□□□□ -0.66
COL27A1-204ENST00000477421 CYP2A7P20853 494 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 NR4A1P22736 598 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 HERVK_113P63132 956 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 RABL3Q5HYI8 236 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 ADGRF1Q5T601 910 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 BPIFB6Q8NFQ5 453 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 OR2T34Q8NGX1 318 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 OR2T3Q8NH03 318 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 CEP19Q96LK0 163 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 TMEM74Q96NL1 305 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 TMEM106CQ9BVX2 250 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 ERVK-6Q9BXR3 956 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 ALG2Q9H553 416 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 TLE6Q9H808 572 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 ZBTB26Q9HCK0 441 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 ASAH2Q9NR71 780 aa10.94□□□□□ -0.66
COL27A1-204ENST00000477421 A0A1W2PRU2 124 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 ZNF623O75123 536 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 ALDH1A2O94788 518 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 JUNP05412 331 aaKnown RBP10.93□□□□□ -0.66
COL27A1-204ENST00000477421 HSMCR30P0CW71 290 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 CYP4B1P13584 511 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 PSMB9P28065 219 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 CSKP41240 450 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 RTP2Q5QGT7 225 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 ADCK1Q86TW2 530 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 ADCY4Q8NFM4 1077 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 OR10Q1Q8NGQ4 319 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 ZIC5Q96T25 663 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 FAM192AQ9GZU8 254 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 IMPAD1Q9NX62 359 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 TRAV19A0A0A6YYK7 116 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 HTR7P34969 479 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 ATP6V1E1P36543 226 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 RAD23AP54725 363 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 CDKN2DP55273 166 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 SULT2A1Q06520 285 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 SCAPQ12770 1279 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 CAMK2GQ13555 558 aaPredicted RBP10.93□□□□□ -0.66
COL27A1-204ENST00000477421 SPIDRQ14159 915 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 UBE2R2Q712K3 238 aaPredicted RBP10.93□□□□□ -0.66
COL27A1-204ENST00000477421 C2CD4AQ8NCU7 369 aaPredicted RBP10.93□□□□□ -0.66
COL27A1-204ENST00000477421 DACT3Q96B18 629 aaPredicted RBP10.93□□□□□ -0.66
COL27A1-204ENST00000477421 FEM1CQ96JP0 617 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 TSGA13Q96PP4 275 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 SMG9Q9H0W8 520 aaKnown RBP10.93□□□□□ -0.66
COL27A1-204ENST00000477421 MFSD1Q9H3U5 465 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 ZNF556Q9HAH1 456 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 SCN3BQ9NY72 215 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 ADAMTS6Q9UKP5 1117 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 HMX2A2RU54 273 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 ANKRD66B4E2M5 251 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 G3V2L1 256 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 CLIC3O95833 236 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 CST1P01037 141 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 POLR2EP19388 210 aaKnown RBP10.93□□□□□ -0.66
COL27A1-204ENST00000477421 CHI3L1P36222 383 aaPredicted RBP10.93□□□□□ -0.66
COL27A1-204ENST00000477421 HK2P52789 917 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms