RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 BNIPLQ7Z465 357 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 ACOT1Q86TX2 421 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 HEATR4Q86WZ0 1026 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 IFNLR1Q8IU57 520 aaPredicted RBP15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 SVOPLQ8N434 492 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 SVOPQ8N4V2 548 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 PPP1R13LQ8WUF5 828 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 NSMCE2Q96MF7 247 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 SLC9A7Q96T83 725 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 MINDY3Q9H8M7 445 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 CENPFP49454 3210 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 A0A1W2PP18 115 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 C17orf102A2RUQ5 167 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 MBLAC1A4D2B0 266 aaPredicted RBP15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 MYADML2A6NDP7 307 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 PSMD11O00231 422 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 TAF4O00268 1085 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 SNPHO15079 494 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 EEDO75530 441 aaKnown RBP15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 RFPL2O75678 378 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 UPK1BO75841 260 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 NDST3O95803 873 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 RAP2AP10114 183 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 IL7RP16871 459 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 PAX3P23760 479 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 SLC26A3P40879 764 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 SLC1A2P43004 574 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 KRT6CP48668 564 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 OTUD3Q5T2D3 398 aaPredicted RBP15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 KIAA0930Q6ICG6 404 aaPredicted RBP15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 TTC23LQ6PF05 361 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 TBPL2Q6SJ96 375 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 DCP2Q8IU60 420 aaKnown RBP15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 DYNC2LI1Q8TCX1 351 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 CLEC4CQ8WTT0 213 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 CAPSLQ8WWF8 208 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 BIRC7Q96CA5 298 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 FBRSL1Q9HCM7 1045 aaKnown RBP15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 AAR2Q9Y312 384 aaKnown RBP15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 OAS3Q9Y6K5 1087 aaKnown RBP15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 MIA3Q5JRA6 1907 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 UPK1AO00322 258 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 SOAT2O75908 522 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 KCNK10P57789 538 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 ZNF33AQ06730 810 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 RPS6KA2Q15349 733 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 ZIK1Q3SY52 487 aaPredicted RBP15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 UGT3A2Q3SY77 523 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 FAM98BQ52LJ0 330 aaKnown RBP15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 PAGE2BQ5JRK9 111 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 ZNF678Q5SXM1 525 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 ARMCX6Q7L4S7 300 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 VASH1Q7L8A9 365 aaPredicted RBP15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 SPATA19Q7Z5L4 167 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 FAM35AQ86V20 835 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 DENND6AQ8IWF6 608 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 KIAA2013Q8IYS2 634 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 AADATQ8N5Z0 425 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 RHOXF1Q8NHV9 184 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 PXYLP1Q8TE99 480 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 TMBIM1Q969X1 311 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 NTAN1Q96AB6 310 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 TEKT5Q96M29 485 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 TOR3AQ9H497 397 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 FAM118AQ9NWS6 357 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 SAGE1Q9NXZ1 904 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 NPAP1Q9NZP6 1156 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 LEF1Q9UJU2 399 aaPredicted RBP15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 GINS2Q9Y248 185 aa15.15■□□□□ 0.02
CLSTN1-205ENST00000477264 TTC34A8MYJ7 566 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 SLC1A7O00341 560 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 SEC24AO95486 1093 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 ENO2P09104 434 aaPredicted RBP15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 TPH1P17752 444 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 KCNA5P22460 613 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 ALDH7A1P49419 539 aaKnown RBP15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 CLEC6AQ6EIG7 209 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 ZDHHC13Q8IUH4 622 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 PHYKPLQ8IUZ5 450 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 NT5C3BQ969T7 300 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 VPS33AQ96AX1 596 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 RNF145Q96MT1 663 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 APOL2Q9BQE5 337 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 PRKD2Q9BZL6 878 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 EPS8L2Q9H6S3 715 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 NTN4Q9HB63 628 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 SLC52A3Q9NQ40 469 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.14■□□□□ 0.012e-8■■■□□ 14.8
CLSTN1-205ENST00000477264 EIF3LQ9Y262 564 aaKnown RBP15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 PCDHB3Q9Y5E6 796 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 KMOO15229 486 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 CACNG3O60359 315 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 MRPS14O60783 128 aaKnown RBP15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 IQCF3P0C7M6 154 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 LCP1P13796 627 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 ERCC2P18074 760 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 GRIK1P39086 918 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 DMPKQ09013 629 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 SCAPQ12770 1279 aa15.14■□□□□ 0.01
CLSTN1-205ENST00000477264 CTBP1Q13363 440 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms