RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ZNF410Q86VK4 478 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF573Q86YE8 665 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 IGDCC3Q8IVU1 814 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 TMEM151BQ8IW70 566 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 LRRC56Q8IYG6 542 aaPredicted RBP2.89□□□□□ -1.95
HMGN4-202ENST00000477243 TTC5Q8N0Z6 440 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 C11orf44Q8N8P7 122 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 ENDOVQ8N8Q3 282 aaKnown RBP2.89□□□□□ -1.95
HMGN4-202ENST00000477243 BANPQ8N9N5 519 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 UXS1Q8NBZ7 420 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 GALNT6Q8NCL4 622 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 DBF4BQ8NFT6 615 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 FBXO18Q8NFZ0 1043 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 OR10S1Q8NGN2 331 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 CFAP61Q8NHU2 1237 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 MDM1Q8TC05 714 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 GANCQ8TET4 914 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 METTL21AQ8WXB1 218 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 ROBO4Q8WZ75 1007 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 KCNJ9Q92806 393 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 DHX58Q96C10 678 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 SNRNP40Q96DI7 357 aaKnown RBP2.89□□□□□ -1.95
HMGN4-202ENST00000477243 CCDC51Q96ER9 411 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 MISP3Q96FF7 219 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 ELMOD3Q96FG2 381 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 AJUBAQ96IF1 538 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 LINC00615Q96LM1 132 aaPredicted RBP2.89□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF396Q96N95 335 aaPredicted RBP2.89□□□□□ -1.95
HMGN4-202ENST00000477243 LRRC3BQ96PB8 259 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 CDK5RAP1Q96SZ6 601 aaKnown RBP2.89□□□□□ -1.95
HMGN4-202ENST00000477243 CDRT15Q96T59 188 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 SEPT5Q99719 369 aaPredicted RBP2.89□□□□□ -1.95
HMGN4-202ENST00000477243 GPA33Q99795 319 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 SMOQ99835 787 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 MYOCQ99972 504 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 TMEM79Q9BSE2 394 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 C17orf80Q9BSJ5 609 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 MTG1Q9BT17 334 aaPredicted RBP2.89□□□□□ -1.95
HMGN4-202ENST00000477243 PTDSS2Q9BVG9 487 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 CCDC94Q9BW85 323 aaPredicted RBP2.89□□□□□ -1.95
HMGN4-202ENST00000477243 KRTAP9-2Q9BYQ4 174 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 OSBPL8Q9BZF1 889 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 SLC7A5P2Q9GIP4 190 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 KCNF1Q9H3M0 494 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 GSTO2Q9H4Y5 243 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 ANKZF1Q9H8Y5 726 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 USP29Q9HBJ7 922 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 GBA2Q9HCG7 927 aaPredicted RBP2.89□□□□□ -1.95
HMGN4-202ENST00000477243 RANGRFQ9HD47 186 aaPredicted RBP2.89□□□□□ -1.95
HMGN4-202ENST00000477243 TRIM36Q9NQ86 728 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 RPRD1BQ9NQG5 326 aaKnown RBP2.89□□□□□ -1.95
HMGN4-202ENST00000477243 C20orf141Q9NUB4 165 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 DNAJC11Q9NVH1 559 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 PRMT7Q9NVM4 692 aaPredicted RBP2.89□□□□□ -1.95
HMGN4-202ENST00000477243 KIAA1456Q9P272 454 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 COPG2Q9UBF2 871 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 HSPB7Q9UBY9 170 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 KLQ9UEF7 1012 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 IPO11Q9UI26 975 aaKnown RBP2.89□□□□□ -1.95
HMGN4-202ENST00000477243 DNPEPQ9ULA0 475 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 SLC45A2Q9UMX9 530 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 KIAA1107Q9UPP5 1409 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 TNFSF13BQ9Y275 285 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 STK38LQ9Y2H1 464 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 SLC27A6Q9Y2P4 619 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 MAB21L2Q9Y586 359 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 PCDHB2Q9Y5E7 798 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 PAPPA2Q9BXP8 1791 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 TENM1Q9UKZ4 2725 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 TTC21AQ8NDW8 1320 aa2.89□□□□□ -1.95
HMGN4-202ENST00000477243 NPC1L1Q9UHC9 1359 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CDC42BPBQ9Y5S2 1711 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 SSC5DA1L4H1 1573 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 KIAA1217Q5T5P2 1943 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ADAMTS13Q76LX8 1427 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 TRIM49BA6NDI0 452 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 FAM187AA6NFU0 413 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 C5orf52A6NGY3 159 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 FAM90A8PA6NJQ4 464 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 MAGEB17A8MXT2 336 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 C1QTNF9BB2RNN3 333 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 H0YIN7 160 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 M0QYT0 321 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 DCLK1O15075 740 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 SPRY1O43609 319 aaPredicted RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 VPS4BO75351 444 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 MOSPD3O75425 235 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF821O75541 412 aaPredicted RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 RAD51DO75771 328 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CELF2O95319 508 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 SLC16A8O95907 504 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ESR1P03372 595 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ALDOAP04075 364 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CSF2P04141 144 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 JUNP05412 331 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 HLA-DOAP06340 250 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 OR52Z1P0C646 297 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 LINGO3P0C6S8 592 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 FAM90A13PP0C7W8 464 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms