RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 F5H5T6 163 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 AZIN1O14977 448 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 CD3EAPO15446 510 aaKnown RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 GCATO75600 419 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 TCEA3O75764 348 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 ARHGEF15O94989 841 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 MFN2O95140 757 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 BCL10O95999 233 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 B3GALT4O96024 378 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 SLC35E2BP0CK96 405 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 HOXA11P31270 313 aaPredicted RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 GRK3P35626 688 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 POLR2IP36954 125 aaKnown RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 DPP6P42658 865 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 ARHGDIAP52565 204 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 SLC16A1P53985 500 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 OXCT1P55809 520 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 MXD1Q05195 221 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 LIPEQ05469 1076 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 RAD51Q06609 339 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 DCTN2Q13561 401 aaKnown RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 KRT72Q14CN4 511 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 ANKS6Q68DC2 871 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 CDCA2Q69YH5 1023 aaPredicted RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 RNF111Q6ZNA4 994 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 DDX53Q86TM3 631 aaKnown RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 GPSM1Q86YR5 675 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 GHDCQ8N2G8 530 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 GANCQ8TET4 914 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 HPS1Q92902 700 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 NACC2Q96BF6 587 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 ARMC5Q96C12 935 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 FAM120BQ96EK7 910 aaKnown RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 ABHD8Q96I13 439 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 SNX27Q96L92 541 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 PDLIM7Q9NR12 457 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 MTMR10Q9NXD2 777 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 CLEC4AQ9UMR7 237 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 LAMB1P07942 1786 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 ATAD5Q96QE3 1844 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 TRIM38O00635 465 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 RTN3O95197 1032 aaPredicted RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 CST1P01037 141 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 MPOP05164 745 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 FCER2P06734 321 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 CAPN1P07384 714 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 MC4RP32245 332 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 GRM5P41594 1212 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 EPS8Q12929 822 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 ADGRE1Q14246 886 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 FRG1Q14331 258 aaKnown RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 LPIN1Q14693 890 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 ZNF648Q5T619 568 aaPredicted RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 EGFLAMQ63HQ2 1017 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 KCTD8Q6ZWB6 473 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 LINC00523Q86TU6 105 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 HORMAD1Q86X24 394 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 CENPLQ8N0S6 344 aaPredicted RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 RP9Q8TA86 221 aaKnown RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 KBTBD7Q8WVZ9 684 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 CAPSLQ8WWF8 208 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 NRBF2Q96F24 287 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 APOLD1Q96LR9 279 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 MTERF1Q99551 399 aaKnown RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 BCO2Q9BYV7 579 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 OSBPL6Q9BZF3 934 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 REXO4Q9GZR2 422 aaKnown RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 DRC3Q9H069 523 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 STN1Q9H668 368 aaKnown RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 ASB8Q9H765 288 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 CXorf21Q9HAI6 301 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 CATSPERZQ9NTU4 200 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 OXSMQ9NWU1 459 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 STK39Q9UEW8 545 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 GTF2IRD1Q9UHL9 959 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 OGDHLQ9ULD0 1010 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 SCN1AP35498 2009 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 WDFY3Q8IZQ1 3526 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 H3BSH0 61 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 TBC1D4O60343 1298 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 GLUD1P00367 558 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 EPB42P16452 691 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 TNFRSF1BP20333 461 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 HARS2P49590 506 aaKnown RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 NDST2P52849 883 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 PRKAG1P54619 331 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 INHBCP55103 352 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 CDKN2DP55273 166 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 PFKPQ01813 784 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 ABRQ12979 859 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 GRIK3Q13003 919 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 MAPRE2Q15555 327 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 TAB1Q15750 504 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 MEP1AQ16819 746 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 KIAA0319Q5VV43 1072 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 GLYATQ6IB77 296 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 DRICH1Q6PGQ1 229 aaPredicted RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 LRRTM3Q86VH5 581 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 P3H2Q8IVL5 708 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 FAM217AQ8IXS0 508 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms