RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 KRTCAP3Q53RY4 240 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 LRIF1Q5T3J3 769 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 HAUS3Q68CZ6 603 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 PMS2CLQ68D20 193 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 HACE1Q8IYU2 909 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 ADSSL1Q8N142 457 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 SLC24A4Q8NFF2 622 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 TMEM255BQ8WV15 326 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 SLC44A1Q8WWI5 657 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 MPP4Q96JB8 637 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 SEMA3CQ99985 751 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 MAF1Q9H063 256 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 PIGMQ9H3S5 423 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 SMC4Q9NTJ3 1288 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 GREB1LQ9C091 1923 aaPredicted RBP6.13□□□□□ -1.43
SMC5-203ENST00000475540 LIPT2A6NK58 231 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 SLC22A3O75751 556 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 PLGP00747 810 aaPredicted RBP6.12□□□□□ -1.43
SMC5-203ENST00000475540 HIST1H2ABP04908 130 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 ZNF23P17027 643 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 TMEM11P17152 192 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 HIST1H2ADP20671 130 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 ARL3P36405 182 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 SIRPB2Q5JXA9 342 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 NSUN5P2Q63ZY6 315 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 FAAH2Q6GMR7 532 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 LCN10Q6JVE6 187 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 MARK2Q7KZI7 788 aaKnown RBP6.12□□□□□ -1.43
SMC5-203ENST00000475540 HIST3H2AQ7L7L0 130 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 PXKQ7Z7A4 578 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 PRAG1Q86YV5 1406 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 EMC1Q8N766 993 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 LINGO1Q96FE5 620 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 MTMR10Q9NXD2 777 aa6.12□□□□□ -1.43
SMC5-203ENST00000475540 FAM72CH0Y354 149 aa6.11□□□□□ -1.43
SMC5-203ENST00000475540 EIF3DO15371 548 aaKnown RBP eCLIP6.11□□□□□ -1.43
SMC5-203ENST00000475540 SYNGR3O43761 229 aa6.11□□□□□ -1.43
SMC5-203ENST00000475540 WDHD1O75717 1129 aaPredicted RBP6.11□□□□□ -1.43
SMC5-203ENST00000475540 KCNK5O95279 499 aa6.11□□□□□ -1.43
SMC5-203ENST00000475540 ICAM1P05362 532 aa6.11□□□□□ -1.43
SMC5-203ENST00000475540 PRSS1P07477 247 aa6.11□□□□□ -1.43
SMC5-203ENST00000475540 ARCN1P48444 511 aaKnown RBP6.11□□□□□ -1.43
SMC5-203ENST00000475540 PRAMEP78395 509 aa6.11□□□□□ -1.43
SMC5-203ENST00000475540 DDX10Q13206 875 aaKnown RBP6.11□□□□□ -1.43
SMC5-203ENST00000475540 KRT32Q14532 448 aa6.11□□□□□ -1.43
SMC5-203ENST00000475540 FAM72AQ5TYM5 149 aa6.11□□□□□ -1.43
SMC5-203ENST00000475540 FAM72DQ6L9T8 149 aa6.11□□□□□ -1.43
SMC5-203ENST00000475540 SARM1Q6SZW1 724 aa6.11□□□□□ -1.43
SMC5-203ENST00000475540 RAD9BQ6WBX8 426 aa6.11□□□□□ -1.43
SMC5-203ENST00000475540 FAM72BQ86X60 149 aa6.11□□□□□ -1.43
SMC5-203ENST00000475540 PPHLN1Q8NEY8 458 aaKnown RBP6.11□□□□□ -1.43
SMC5-203ENST00000475540 OR52I2Q8NH67 350 aa6.11□□□□□ -1.43
SMC5-203ENST00000475540 HDAC2Q92769 488 aaKnown RBP6.11□□□□□ -1.43
SMC5-203ENST00000475540 PGLYRP2Q96PD5 576 aa6.11□□□□□ -1.43
SMC5-203ENST00000475540 EPB41L5Q9HCM4 733 aa6.11□□□□□ -1.43
SMC5-203ENST00000475540 MAP3K20Q9NYL2 800 aaKnown RBP6.11□□□□□ -1.43
SMC5-203ENST00000475540 TCF19Q9Y242 345 aa6.11□□□□□ -1.43
SMC5-203ENST00000475540 A0A087X0M5 115 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 A0A1B0GX30 115 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 CTAGE9A4FU28 777 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 OR5K3A6NET4 321 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 H3BQ06 376 aaPredicted RBP6.1□□□□□ -1.43
SMC5-203ENST00000475540 GPC4O75487 556 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 CTAGE8P0CG41 777 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 AHRP35869 848 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 SREBF2Q12772 1141 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 MAMLD1Q13495 774 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 CCNYL2Q5T2Q4 361 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 CCDC190Q86UF4 302 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 CTAGE4Q8IX94 777 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 RDM1Q8NG50 284 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 PHF21AQ96BD5 680 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 FBXO17Q96EF6 278 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 EGLN2Q96KS0 407 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 C1orf74Q96LT6 269 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 SMC6Q96SB8 1091 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 NAP1L4Q99733 375 aaKnown RBP6.1□□□□□ -1.43
SMC5-203ENST00000475540 MUC13Q9H3R2 512 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 SH2D4AQ9H788 454 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 TERF2IPQ9NYB0 399 aa6.1□□□□□ -1.43
SMC5-203ENST00000475540 MARCH4Q9P2E8 410 aaPredicted RBP6.1□□□□□ -1.43
SMC5-203ENST00000475540 CORO1CQ9ULV4 474 aaPredicted RBP6.1□□□□□ -1.43
SMC5-203ENST00000475540 ARHGEF40Q8TER5 1519 aa6.09□□□□□ -1.43
SMC5-203ENST00000475540 IGLV5-45A0A087WSX0 123 aa6.09□□□□□ -1.43
SMC5-203ENST00000475540 ANKRD66B4E2M5 251 aa6.09□□□□□ -1.43
SMC5-203ENST00000475540 BUD23O43709 281 aaKnown RBP6.09□□□□□ -1.43
SMC5-203ENST00000475540 RARGP13631 454 aa6.09□□□□□ -1.43
SMC5-203ENST00000475540 NR2F2P24468 414 aa6.09□□□□□ -1.43
SMC5-203ENST00000475540 PPARGP37231 505 aaPredicted RBP6.09□□□□□ -1.43
SMC5-203ENST00000475540 MLLT10P55197 1068 aa6.09□□□□□ -1.43
SMC5-203ENST00000475540 RPL24P83731 157 aaKnown RBP6.09□□□□□ -1.43
SMC5-203ENST00000475540 SETQ01105 290 aaPredicted RBP6.09□□□□□ -1.43
SMC5-203ENST00000475540 ACVR2BQ13705 512 aa6.09□□□□□ -1.43
SMC5-203ENST00000475540 PLA2G4FQ68DD2 849 aa6.09□□□□□ -1.43
SMC5-203ENST00000475540 GSG1LQ6UXU4 331 aa6.09□□□□□ -1.43
SMC5-203ENST00000475540 TMTC2Q8N394 836 aa6.09□□□□□ -1.43
SMC5-203ENST00000475540 NGEFQ8N5V2 710 aa6.09□□□□□ -1.43
SMC5-203ENST00000475540 PPP4R1Q8TF05 950 aa6.09□□□□□ -1.43
SMC5-203ENST00000475540 ALG14Q96F25 216 aa6.09□□□□□ -1.43
SMC5-203ENST00000475540 NUDCD1Q96RS6 583 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms