RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 COQ10AQ96MF6 247 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 GUCD1Q96NT3 240 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 COPS8Q99627 209 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 ELAC2Q9BQ52 826 aaKnown RBP13.61□□□□□ -0.23
TRAF4-210ENST00000475329 RIOK2Q9BVS4 552 aaKnown RBP13.61□□□□□ -0.23
TRAF4-210ENST00000475329 BOCQ9BWV1 1114 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 SLCO1B3Q9NPD5 702 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 CPSF2Q9P2I0 782 aaKnown RBP13.61□□□□□ -0.23
TRAF4-210ENST00000475329 IGLV3-16A0A075B6K0 115 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 TARM1B6A8C7 271 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 MID1O15344 667 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 NARSO43776 548 aaKnown RBP13.6□□□□□ -0.23
TRAF4-210ENST00000475329 SERPINE1P05121 402 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 RALBP11234 206 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 CD1DP15813 335 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 TFEBP19484 476 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 CHRM3P20309 590 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 GRK2P25098 689 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 CCDC15Q0P6D6 951 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 BST1Q10588 318 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 ASPHQ12797 758 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 STX3Q13277 289 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 SETMARQ53H47 684 aaPredicted RBP13.6□□□□□ -0.23
TRAF4-210ENST00000475329 GPRC6AQ5T6X5 926 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 PIP5KL1Q5T9C9 394 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 PTCRAQ6ISU1 281 aaPredicted RBP13.6□□□□□ -0.23
TRAF4-210ENST00000475329 PAQR3Q6TCH7 311 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 MACC1Q6ZN28 852 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 SPATA21Q7Z572 469 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 PIGWQ7Z7B1 504 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 TMEM151AQ8N4L1 468 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 NKAPQ8N5F7 415 aaKnown RBP13.6□□□□□ -0.23
TRAF4-210ENST00000475329 IL17RCQ8NAC3 791 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 SIDT2Q8NBJ9 832 aaKnown RBP13.6□□□□□ -0.23
TRAF4-210ENST00000475329 CCDC197Q8NCU1 140 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 CD200R1Q8TD46 325 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 CXorf40AQ8TE69 158 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 SCAMP4Q969E2 229 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 AP2M1Q96CW1 435 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 NUS1Q96E22 293 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 TRPM6Q9BX84 2022 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 UNKQ9C0B0 810 aaKnown RBP13.6□□□□□ -0.23
TRAF4-210ENST00000475329 DERL2Q9GZP9 239 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 ABCG8Q9H221 673 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 SLC2A4RGQ9NR83 387 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 MTF2Q9Y483 593 aaPredicted RBP13.6□□□□□ -0.23
TRAF4-210ENST00000475329 FADS3Q9Y5Q0 445 aa13.6□□□□□ -0.23
TRAF4-210ENST00000475329 CFAP99D6REC4 459 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 F8W8V4 182 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 AP1G1O43747 822 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 LZTS3O60299 673 aaPredicted RBP13.59□□□□□ -0.23
TRAF4-210ENST00000475329 SNX3O60493 162 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 TRIM13O60858 407 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 SBK3P0C264 359 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 TROVE2P10155 538 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRAF4-210ENST00000475329 SRFP11831 508 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 C6P13671 934 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 HOXB2P14652 356 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 GM2AP17900 193 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 AKT1P31749 480 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 DRD3P35462 400 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 ATP6V0D1P61421 351 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 RPS14P62263 151 aaKnown RBP13.59□□□□□ -0.23
TRAF4-210ENST00000475329 TDGQ13569 410 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 ZSCAN26Q16670 478 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 PUS10Q3MIT2 529 aaKnown RBP13.59□□□□□ -0.23
TRAF4-210ENST00000475329 FBXO43Q4G163 708 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 AGBL4Q5VU57 503 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 LIPMQ5VYY2 423 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 CGB2Q6NT52 195 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 ZCCHC23Q6ZST2 131 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 OTOAQ7RTW8 1153 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 CACUL1Q86Y37 369 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 HDDC3Q8N4P3 179 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 AADATQ8N5Z0 425 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 DDHD1Q8NEL9 900 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 GIMAP7Q8NHV1 300 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 CCDC126Q96EE4 140 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 CCDC97Q96F63 343 aaPredicted RBP13.59□□□□□ -0.23
TRAF4-210ENST00000475329 DCUN1D1Q96GG9 259 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 SEC16BQ96JE7 1060 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 C7orf26Q96N11 449 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 VPS35Q96QK1 796 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 ALG9Q9H6U8 611 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 SARS2Q9NP81 518 aaKnown RBP13.59□□□□□ -0.23
TRAF4-210ENST00000475329 OXSMQ9NWU1 459 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 GALPQ9UBC7 116 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 COQ6Q9Y2Z9 468 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 DHRS7Q9Y394 339 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 PRSS21Q9Y6M0 314 aa13.59□□□□□ -0.23
TRAF4-210ENST00000475329 CCDC189A1A4V9 331 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 ERICH4A6NGS2 130 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 IQCF5A8MTL0 148 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 FADS2P1A8MWK0 482 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 TMEM114B3SHH9 223 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 TSPAN6O43657 245 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 ZBTB14O43829 449 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 MMP20O60882 483 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 ADAM23O75077 832 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 SNNO75324 88 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms