RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 PCED1BQ96HM7 432 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 LHX5Q9H2C1 402 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 COLEC10Q9Y6Z7 277 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 RIC1Q4ADV7 1423 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 C5orf60A6NFR6 353 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 AHCYL1O43865 530 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 MMP8P22894 467 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 SLC26A3P40879 764 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 RPIAP49247 311 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 VPS26BQ4G0F5 336 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 STYXQ8WUJ0 223 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 BSNDQ8WZ55 320 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 TEFMQ96QE5 360 aaKnown RBP10.9□□□□□ -0.66
VAPB-204ENST00000475243 PHPT1Q9NRX4 125 aaPredicted RBP10.9□□□□□ -0.66
VAPB-204ENST00000475243 MRPS33Q9Y291 106 aaKnown RBP10.9□□□□□ -0.66
VAPB-204ENST00000475243 BTNL10A8MVZ5 291 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 HSPB3Q12988 150 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 OR10H5Q8NGA6 315 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 NECTIN3Q9NQS3 549 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 OAS3Q9Y6K5 1087 aaKnown RBP10.9□□□□□ -0.67
VAPB-204ENST00000475243 A8MUI8 341 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 ALOX15BO15296 676 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 OR1F1O43749 312 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 PPP1R11O60927 126 aaPredicted RBP10.9□□□□□ -0.67
VAPB-204ENST00000475243 BPGMP07738 259 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 PTPN9P43378 593 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 DUSP28Q4G0W2 176 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 PGBD2Q6P3X8 592 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 BEND7Q8N7W2 519 aaPredicted RBP10.9□□□□□ -0.67
VAPB-204ENST00000475243 KCT2Q8NC54 265 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 OR2T12Q8NG77 320 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 TWIST2Q8WVJ9 160 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 ABCB9Q9NP78 766 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 ARL8BQ9NVJ2 186 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 PDP1Q9P0J1 537 aaPredicted RBP10.9□□□□□ -0.67
VAPB-204ENST00000475243 PLLPQ9Y342 182 aa10.9□□□□□ -0.67
VAPB-204ENST00000475243 GPR25O00155 361 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 DDX3YO15523 660 aaKnown RBP10.89□□□□□ -0.67
VAPB-204ENST00000475243 PRAMEF1O95521 474 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 IFNGP01579 166 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 PKMP14618 531 aaKnown RBP10.89□□□□□ -0.67
VAPB-204ENST00000475243 STXBP1P61764 594 aaKnown RBP10.89□□□□□ -0.67
VAPB-204ENST00000475243 SLC20A2Q08357 652 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 SFRP1Q8N474 314 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 ZBTB2Q8N680 514 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 ARL14EPQ8N8R7 260 aaPredicted RBP10.89□□□□□ -0.67
VAPB-204ENST00000475243 FAM110BQ8TC76 370 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 TRIM63Q969Q1 353 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 CIB1Q99828 191 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 TCF25Q9BQ70 676 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 MRIQ9BWK5 157 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 RPTORQ8N122 1335 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 KCNU1A8MYU2 1149 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 DCLK1O15075 740 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 B4GALT4O60513 344 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 SPAM1P38567 509 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 MASP1P48740 699 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 DRG2P55039 364 aaKnown RBP10.89□□□□□ -0.67
VAPB-204ENST00000475243 CASP9P55211 416 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 ZNF155Q12901 538 aaPredicted RBP10.89□□□□□ -0.67
VAPB-204ENST00000475243 GLYATQ6IB77 296 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 NEK5Q6P3R8 708 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 ADGRG6Q86SQ4 1221 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 JAZF1Q86VZ6 243 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 SPPL2BQ8TCT7 592 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 ARNTL2Q8WYA1 636 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 CYP2S1Q96SQ9 504 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 TCF12Q99081 682 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 PRDM8Q9NQV8 689 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 H7C0S8 307 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 MAP2K7O14733 419 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 CCNDBP1O95273 360 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 TACR2P21452 398 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 SNAPC1Q16533 368 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 C6orf52Q5T4I8 152 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 CHST15Q7LFX5 561 aaPredicted RBP10.89□□□□□ -0.67
VAPB-204ENST00000475243 CROCCP3Q8IVE0 287 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 GAS2L1Q99501 681 aaPredicted RBP10.89□□□□□ -0.67
VAPB-204ENST00000475243 GBA3Q9H227 469 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 AP4B1Q9Y6B7 739 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 PSMD9O00233 223 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 SAP18O00422 153 aaKnown RBP10.89□□□□□ -0.67
VAPB-204ENST00000475243 XKRYO14609 159 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 IPO13O94829 963 aaKnown RBP10.89□□□□□ -0.67
VAPB-204ENST00000475243 RLN1P04808 185 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 SELPP16109 830 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 NMBRP28336 390 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 S100GP29377 79 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 CRHR1P34998 444 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 PEX6Q13608 980 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 DGKBQ9Y6T7 804 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 CLUHO75153 1309 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 FSCN2O14926 492 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 NOS1APO75052 506 aaPredicted RBP10.89□□□□□ -0.67
VAPB-204ENST00000475243 CLDN9O95484 217 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 KELP23276 732 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 GALNT18Q6P9A2 607 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 SPATA19Q7Z5L4 167 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 TRABD2AQ86V40 505 aa10.89□□□□□ -0.67
VAPB-204ENST00000475243 GALNT13Q8IUC8 556 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms