RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 KIAA0754O94854 1291 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 UBXN7O94888 489 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 NDUFA10O95299 355 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 VIPP01282 170 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 HLA-DQB2P05538 268 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 KRT7P08729 469 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 FURINP09958 794 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 ANKRD34CP0C6C1 535 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 AMD1P17707 334 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 CES1P23141 567 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 PRKCIP41743 596 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 GALNT2Q10471 571 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 IFI16Q16666 785 aaKnown RBP13.81□□□□□ -0.2
CCDC78-209ENST00000474647 CRTC2Q53ET0 693 aaPredicted RBP13.81□□□□□ -0.2
CCDC78-209ENST00000474647 ANKRD20A8PQ5CZ79 823 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 ZNF569Q5MCW4 686 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 NCBP2-AS2Q69YL0 99 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 ASB18Q6ZVZ8 466 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 TMEM135Q86UB9 458 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 LRRC49Q8IUZ0 686 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 CCDC13Q8IYE1 715 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 PLEKHG4BQ96PX9 1271 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 SPATA16Q9BXB7 569 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 NAT10Q9H0A0 1025 aaKnown RBP13.81□□□□□ -0.2
CCDC78-209ENST00000474647 CARD9Q9H257 536 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 TSPY26PQ9H489 355 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 OGFRQ9NZT2 677 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 POLHQ9Y253 713 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 DNAJC16Q9Y2G8 782 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 PDZK1P1A8MUH7 402 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 MATN3O15232 486 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 RFPL1O75677 317 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 SLC25A14O95258 325 aaPredicted RBP13.8□□□□□ -0.2
CCDC78-209ENST00000474647 PRLP01236 227 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 C9P02748 559 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 ZNF8P17098 575 aaPredicted RBP13.8□□□□□ -0.2
CCDC78-209ENST00000474647 CASP14P31944 242 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 CD86P42081 329 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 LEPRP48357 1165 aaKnown RBP13.8□□□□□ -0.2
CCDC78-209ENST00000474647 UBE2IP63279 158 aaKnown RBP13.8□□□□□ -0.2
CCDC78-209ENST00000474647 NIPAL4Q0D2K0 466 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 GALNT3Q14435 633 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 C4orf17Q53FE4 359 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 CRYBG3Q68DQ2 2970 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 ALG1LQ6GMV1 187 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 TMEM26Q6ZUK4 368 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 ARRDC2Q8TBH0 407 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 MAML1Q92585 1016 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 NUP85Q9BW27 656 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 TWSG1Q9GZX9 223 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 ISCUQ9H1K1 167 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 RTN4Q9NQC3 1192 aaKnown RBP13.8□□□□□ -0.2
CCDC78-209ENST00000474647 AIPL1Q9NZN9 384 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 SCHIP1Q9P0W5 487 aaPredicted RBP13.8□□□□□ -0.2
CCDC78-209ENST00000474647 RCOR3Q9P2K3 495 aaPredicted RBP13.8□□□□□ -0.2
CCDC78-209ENST00000474647 IP6K2Q9UHH9 426 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 SLC30A1Q9Y6M5 507 aa13.8□□□□□ -0.2
CCDC78-209ENST00000474647 CCNYL3P0C7X3 344 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 IL4RP24394 825 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 CCNCP24863 283 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 UQCRFS1P47985 274 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 RPL26P61254 145 aaKnown RBP13.79□□□□□ -0.2
CCDC78-209ENST00000474647 DPYSL3Q14195 570 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 PAFAH1B3Q15102 231 aaKnown RBP13.79□□□□□ -0.2
CCDC78-209ENST00000474647 QPCTQ16769 361 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 FILIP1LQ4L180 1135 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 HIST2H2BCQ6DN03 193 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 TCTN3Q6NUS6 607 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 FAM92BQ6ZTR7 304 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 RAVER1Q8IY67 606 aaKnown RBP13.79□□□□□ -0.2
CCDC78-209ENST00000474647 NIPA2Q8N8Q9 360 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 RSC1A1Q92681 617 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 PSMG3-AS1Q96PY0 264 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 LYSMD1Q96S90 227 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 MLPHQ9BV36 600 aaPredicted RBP13.79□□□□□ -0.2
CCDC78-209ENST00000474647 THAP2Q9H0W7 228 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 ZNF768Q9H5H4 540 aaKnown RBP13.79□□□□□ -0.2
CCDC78-209ENST00000474647 AMACRQ9UHK6 382 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 KCND3Q9UK17 655 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 TLK1Q9UKI8 766 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 RPL26L1Q9UNX3 145 aaKnown RBP13.79□□□□□ -0.2
CCDC78-209ENST00000474647 SPTBP11277 2137 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 CACNA1DQ01668 2161 aa13.79□□□□□ -0.2
CCDC78-209ENST00000474647 PIPSLA2A3N6 862 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 ANKRD66B4E2M5 251 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 KIF1CO43896 1103 aaKnown RBP13.78□□□□□ -0.2
CCDC78-209ENST00000474647 VPS4BO75351 444 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 DNAJB5O75953 348 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 PIRTP0C851 137 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 XRCC1P18887 633 aaPredicted RBP13.78□□□□□ -0.2
CCDC78-209ENST00000474647 RPL10P27635 214 aaKnown RBP13.78□□□□□ -0.2
CCDC78-209ENST00000474647 CAPZBP47756 277 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 CD97P48960 835 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 DNASE1L3Q13609 305 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 IL11RAQ14626 422 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 HADHQ16836 314 aaKnown RBP13.78□□□□□ -0.2
CCDC78-209ENST00000474647 CACHD1Q5VU97 1274 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 IRGCQ6NXR0 463 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 EFCAB3Q8N7B9 438 aa13.78□□□□□ -0.2
CCDC78-209ENST00000474647 CCNYQ8ND76 341 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms