RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 ZRANB2O95218 330 aaKnown RBP eCLIP20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 ITGB2P05107 769 aa20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 ATP1A2P50993 1020 aa20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 RAB15P59190 212 aa20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 NFATC2Q13469 925 aa20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 SPA17Q15506 151 aa20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 KAZNQ674X7 775 aa20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 ZNF761Q86XN6 746 aaPredicted RBP20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 CCDC170Q8IYT3 715 aa20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 KATNAL2Q8IYT4 538 aa20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 RCOR2Q8IZ40 523 aa20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 PLEKHG4BQ96PX9 1271 aa20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 TRIM5Q9C035 493 aa20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 SLC39A1Q9NY26 324 aa20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 SAE1Q9UBE0 346 aaPredicted RBP20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 CPNE7Q9UBL6 633 aa20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 ADGRG1Q9Y653 693 aa20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 SDK2Q58EX2 2172 aa20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 PIEZO2Q9H5I5 2752 aa20.11■□□□□ 0.81
PDLIM4-206ENST00000474421 CHUKO15111 745 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 KMOO15229 486 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 VEGFDO43915 354 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 LCA5LO95447 670 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 EPOP01588 193 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 BPIP17213 487 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 MPSTP25325 297 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 LY6DQ14210 128 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 DCAF12Q5T6F0 453 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 ZDHHC20Q5W0Z9 365 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 B4GALNT4Q76KP1 1039 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 ADGRG6Q86SQ4 1221 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 FAM129CQ86XR2 697 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 TC2NQ8N9U0 490 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 ART4Q93070 314 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 RBM41Q96IZ5 413 aaKnown RBP20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 TEFMQ96QE5 360 aaKnown RBP20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 OSGEPL1Q9H4B0 414 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 KLC4Q9NSK0 619 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 TMEM9Q9P0T7 183 aa20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 KLHL8Q9P2G9 620 aaPredicted RBP20.1■□□□□ 0.81
PDLIM4-206ENST00000474421 ZNF462Q96JM2 2506 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 EFCAB7A8K855 629 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 HACD1B0YJ81 288 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 PECAM1P16284 738 aaPredicted RBP20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 HMGCLP35914 325 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 WASHC5Q12768 1159 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 INSCQ1MX18 579 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 C11orf63Q6NUN7 778 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 VASH2Q86V25 355 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 LRRTM4Q86VH4 590 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 CCDC50Q8IVM0 306 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 NCSTNQ92542 709 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 CALR3Q96L12 384 aaKnown RBP20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 VPS35Q96QK1 796 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 TIMM29Q9BSF4 260 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 UCK1Q9HA47 277 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 ARFGAP3Q9NP61 516 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 PRDM8Q9NQV8 689 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 UBP1Q9NZI7 540 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 HACD3Q9P035 362 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 PCDHGA4Q9Y5G9 962 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 PCDHA13Q9Y5I0 950 aa20.09■□□□□ 0.81
PDLIM4-206ENST00000474421 LOC285095A0A1B0GVY8 99 aa20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 LILRA5A6NI73 299 aa20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 CDK14O94921 469 aa20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 ZNF7P17097 686 aaPredicted RBP20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 CD68P34810 354 aaPredicted RBP20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 CYLC1P35663 651 aaPredicted RBP20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 WNT3AP56704 352 aa20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 FAM182AQ5T1J6 154 aa20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 ZNF648Q5T619 568 aaPredicted RBP20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 CRTC3Q6UUV7 619 aa20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 ZC3H18Q86VM9 953 aaKnown RBP20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 DTX3LQ8TDB6 740 aa20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 BRSK1Q8TDC3 778 aa20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 FCRL5Q96RD9 977 aa20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 TRHDEQ9UKU6 1024 aa20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 SPO11Q9Y5K1 396 aa20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 B3GALT1Q9Y5Z6 326 aa20.08■□□□□ 0.81
PDLIM4-206ENST00000474421 hCG_1818297A0A087WSY0 165 aa20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 PLA2G2AP14555 144 aa20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 VCLP18206 1134 aa20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 XRCC1P18887 633 aaPredicted RBP20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 NFKB1P19838 968 aa20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 MAPK9P45984 424 aa20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 UBE2IP63279 158 aaKnown RBP20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 SRSF6Q13247 344 aaKnown RBP20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 MPP3Q13368 585 aa20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 GTF2H3Q13889 308 aa20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 LLGL1Q15334 1064 aa20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 PPP2R5EQ16537 467 aa20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 SNAP47Q5SQN1 464 aa20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 KDELC1Q6UW63 502 aa20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 PID1Q7Z2X4 250 aa20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 ARHGAP22Q7Z5H3 698 aa20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 PLXDC1Q8IUK5 500 aa20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 TRIM48Q8IWZ4 208 aa20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 IL22RA1Q8N6P7 574 aa20.07■□□□□ 0.8
PDLIM4-206ENST00000474421 HTR3CQ8WXA8 447 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms