RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 BEND5Q7L4P6 421 aa18.49■□□□□ 0.55
ECHDC1-214ENST00000474289 TAS2R42Q7RTR8 314 aa18.49■□□□□ 0.55
ECHDC1-214ENST00000474289 PAGE2Q7Z2X7 111 aa18.49■□□□□ 0.55
ECHDC1-214ENST00000474289 TP53INP1Q96A56 240 aa18.49■□□□□ 0.55
ECHDC1-214ENST00000474289 CELF6Q96J87 481 aaKnown RBP18.49■□□□□ 0.55
ECHDC1-214ENST00000474289 CYP2S1Q96SQ9 504 aa18.49■□□□□ 0.55
ECHDC1-214ENST00000474289 GPR20Q99678 358 aa18.49■□□□□ 0.55
ECHDC1-214ENST00000474289 FICDQ9BVA6 458 aa18.49■□□□□ 0.55
ECHDC1-214ENST00000474289 MIA3Q5JRA6 1907 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 LRRC14BA6NHZ5 514 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 TNFRSF10AO00220 468 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 XPNPEP2O43895 674 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 GSNP06396 782 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 PAMP19021 973 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 ACVR2AP27037 513 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 FAM209AQ5JX71 171 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 KANK2Q63ZY3 851 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 KIAA0930Q6ICG6 404 aaPredicted RBP18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 HFE2Q6ZVN8 426 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 P2RY8Q86VZ1 359 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 KLHDC8BQ8IXV7 354 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 DTWD1Q8N5C7 304 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 RORBQ92753 470 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 FDXACB1Q9BRP7 624 aaPredicted RBP18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 OSBPL10Q9BXB5 764 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 EVLQ9UI08 416 aaPredicted RBP18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 HACL1Q9UJ83 578 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 TMA7Q9Y2S6 64 aaKnown RBP18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 AAR2Q9Y312 384 aaKnown RBP18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 TSC2P49815 1807 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 ISPDA4D126 451 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 DLGAP3O95886 979 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 GRK3P35626 688 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 CASP3P42574 277 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 NDUFV1P49821 464 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 PPP2R2BQ00005 443 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 SLC14A2Q15849 920 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 FAM187BQ17R55 369 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 INTS6LQ5JSJ4 861 aaKnown RBP18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 SULT1C3Q6IMI6 304 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 RALGPS2Q86X27 583 aaPredicted RBP18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 LRRC49Q8IUZ0 686 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 PJA1Q8NG27 643 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 TSPEARQ8WU66 669 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 PTERQ96BW5 349 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 YIPF6Q96EC8 236 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 ZNF419Q96HQ0 510 aaPredicted RBP18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 PCDHGB1Q9Y5G3 927 aa18.48■□□□□ 0.55
ECHDC1-214ENST00000474289 FAM92AA1XBS5 289 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 NOTOA8MTQ0 251 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 M0QX08 132 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 PSMD3O43242 534 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 CACNG3O60359 315 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 HMGB2P26583 209 aaKnown RBP18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 MZF1P28698 734 aaPredicted RBP18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 CHRNA4P43681 627 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 SEPHS1P49903 392 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 NFKB2Q00653 900 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 HECTD2Q5U5R9 776 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 POC5Q8NA72 575 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 ITFG1Q8TB96 612 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 SH3RF2Q8TEC5 729 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 NSUN5Q96P11 429 aaKnown RBP18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 LRRC3Q9BY71 257 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 NFKBIZQ9BYH8 718 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 ASPSCR1Q9BZE9 553 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 R3HDMLQ9H3Y0 253 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 MAGEL2Q9UJ55 1249 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 INTS6Q9UL03 887 aaKnown RBP18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 SNX10Q9Y5X0 201 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 CCDC154A6NI56 674 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 SYCE1LA8MT33 242 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 ENO2P09104 434 aaPredicted RBP18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 SPNP16150 400 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 CXCR2P25025 360 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 CLCN5P51795 746 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 EMX2Q04743 252 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 EPS8Q12929 822 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 ACOX1Q15067 660 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 FAM98BQ52LJ0 330 aaKnown RBP18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 ZNF484Q5JVG2 852 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 STEAP3Q658P3 488 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 PRR23BQ6ZRT6 265 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 UTS2BQ765I0 119 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 TMEM199Q8N511 208 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 PTGR2Q8N8N7 351 aaPredicted RBP18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 TSPAN17Q96FV3 270 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 ATXN3LQ9H3M9 355 aa18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 WDR6Q9NNW5 1121 aaKnown RBP18.47■□□□□ 0.55
ECHDC1-214ENST00000474289 LOC100130705A0A1B0GUX0 176 aa18.46■□□□□ 0.55
ECHDC1-214ENST00000474289 TYW5A2RUC4 315 aaKnown RBP18.46■□□□□ 0.55
ECHDC1-214ENST00000474289 EIF3FO00303 357 aaPredicted RBP18.46■□□□□ 0.55
ECHDC1-214ENST00000474289 NDST3O95803 873 aa18.46■□□□□ 0.55
ECHDC1-214ENST00000474289 MAP2K4P45985 399 aa18.46■□□□□ 0.55
ECHDC1-214ENST00000474289 UFM1P61960 85 aa18.46■□□□□ 0.55
ECHDC1-214ENST00000474289 DGCR6Q14129 220 aa18.46■□□□□ 0.55
ECHDC1-214ENST00000474289 SLX4IPQ5VYV7 408 aa18.46■□□□□ 0.55
ECHDC1-214ENST00000474289 KDELC2Q7Z4H8 507 aa18.46■□□□□ 0.55
ECHDC1-214ENST00000474289 FAM86B1Q8N7N1 296 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms