RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 PDPK2PQ6A1A2 396 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 ADGRG6Q86SQ4 1221 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 LUZP1Q86V48 1076 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 VSIG1Q86XK7 387 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 PLXDC1Q8IUK5 500 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 TRAM1L1Q8N609 369 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 CCNYQ8ND76 341 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 STARD8Q92502 1023 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 RAPGEF5Q92565 580 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 GLYATL1Q969I3 302 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 TADA1Q96BN2 335 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 ZNF830Q96NB3 372 aaPredicted RBP13.21□□□□□ -0.29
COPS7B-219ENST00000474042 PLEKHG4BQ96PX9 1271 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 ZSCAN5AQ9BUG6 496 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 SPATA16Q9BXB7 569 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 PACSIN1Q9BY11 444 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 BRD8Q9H0E9 1235 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 EPN3Q9H201 632 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 OR2AG1Q9H205 316 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 TRIT1Q9H3H1 467 aaKnown RBP13.21□□□□□ -0.29
COPS7B-219ENST00000474042 ZFYVE1Q9HBF4 777 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 ARFGAP3Q9NP61 516 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 SCHIP1Q9P0W5 487 aaPredicted RBP13.21□□□□□ -0.29
COPS7B-219ENST00000474042 CTTNBP2NLQ9P2B4 639 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 LUC7L2Q9Y383 392 aaKnown RBP13.21□□□□□ -0.29
COPS7B-219ENST00000474042 DOPEY2Q9Y3R5 2298 aa13.21□□□□□ -0.29
COPS7B-219ENST00000474042 POLR1CO15160 346 aaPredicted RBP13.2□□□□□ -0.3
COPS7B-219ENST00000474042 H2AFZP0C0S5 128 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 PRKAR1AP10644 381 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 XRCC1P18887 633 aaPredicted RBP13.2□□□□□ -0.3
COPS7B-219ENST00000474042 KDELR1P24390 212 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 UBASH3AP57075 661 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 ZNF648Q5T619 568 aaPredicted RBP13.2□□□□□ -0.3
COPS7B-219ENST00000474042 ALS2CLQ60I27 953 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 SLC9A4Q6AI14 798 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 TMEM26Q6ZUK4 368 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 H2AFVQ71UI9 128 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 TMC3Q7Z5M5 1100 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 PTRH1Q86Y79 214 aaKnown RBP13.2□□□□□ -0.3
COPS7B-219ENST00000474042 UNC5BQ8IZJ1 945 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 ESX1Q8N693 406 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 C9orf43Q8TAL5 461 aaPredicted RBP13.2□□□□□ -0.3
COPS7B-219ENST00000474042 CPLX3Q8WVH0 158 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 CTNNBL1Q8WYA6 563 aaPredicted RBP13.2□□□□□ -0.3
COPS7B-219ENST00000474042 IMP4Q96G21 291 aaKnown RBP13.2□□□□□ -0.3
COPS7B-219ENST00000474042 C9orf72Q96LT7 481 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 OLFM3Q96PB7 478 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 TIMM29Q9BSF4 260 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 OSGEPL1Q9H4B0 414 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 MAGEE1Q9HCI5 957 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 TRIM39Q9HCM9 518 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 RAD18Q9NS91 495 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 KLC4Q9NSK0 619 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 SLC23A2Q9UGH3 650 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 KLHL3Q9UH77 587 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 ZNF711Q9Y462 761 aa13.2□□□□□ -0.3
COPS7B-219ENST00000474042 C3orf70A6NLC5 250 aaPredicted RBP13.19□□□□□ -0.3
COPS7B-219ENST00000474042 TOX3O15405 576 aaPredicted RBP13.19□□□□□ -0.3
COPS7B-219ENST00000474042 MTA2O94776 668 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 SLC25A14O95258 325 aaPredicted RBP13.19□□□□□ -0.3
COPS7B-219ENST00000474042 PIRTP0C851 137 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 CASRP41180 1078 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 SLC19A1P41440 591 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 TPM4P67936 248 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 MC1RQ01726 317 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 SLC18A3Q16572 532 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 INSCQ1MX18 579 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 SKIDA1Q1XH10 827 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 ASTE1Q2TB18 679 aaPredicted RBP13.19□□□□□ -0.3
COPS7B-219ENST00000474042 PLA2G4EQ3MJ16 856 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 KHDC1Q4VXA5 237 aaKnown RBP13.19□□□□□ -0.3
COPS7B-219ENST00000474042 CRTC3Q6UUV7 619 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 LRRTM4Q86VH4 590 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 ZNF547Q8IVP9 402 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 CEP41Q9BYV8 373 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 ZNF768Q9H5H4 540 aaKnown RBP13.19□□□□□ -0.3
COPS7B-219ENST00000474042 POT1Q9NUX5 634 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 ZNF624Q9P2J8 865 aaPredicted RBP13.19□□□□□ -0.3
COPS7B-219ENST00000474042 ANAPC2Q9UJX6 822 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 SHOC2Q9UQ13 582 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 SLC30A1Q9Y6M5 507 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 RPS6KL1Q9Y6S9 549 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 FLNCQ14315 2725 aa13.19□□□□□ -0.3
COPS7B-219ENST00000474042 LRRD1A4D1F6 860 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 GOLGA6L3A6NEY3 463 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 KMOO15229 486 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 VEGFDO43915 354 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 UBXN7O94888 489 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 TMEM253P0C7T8 217 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 BRAFP15056 766 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 ZNF28P17035 718 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 ZNF7P17097 686 aaPredicted RBP13.18□□□□□ -0.3
COPS7B-219ENST00000474042 BPIP17213 487 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 F8A1P23610 371 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 CASP14P31944 242 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 CAPZBP47756 277 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 FOXK1P85037 733 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 SRSF1Q07955 248 aaKnown RBP eCLIP13.18□□□□□ -0.3
COPS7B-219ENST00000474042 COLEC12Q5KU26 742 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 FAM182AQ5T1J6 154 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms