RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 CD300LGQ6UXG3 332 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 CYP2R1Q6VVX0 501 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 EFL1Q7Z2Z2 1120 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 TFAP2DQ7Z6R9 452 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 CTU1Q7Z7A3 348 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 TTC7BQ86TV6 843 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 MIB1Q86YT6 1006 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC41A1Q8IVJ1 513 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 LRRC43Q8N309 656 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 FIBCD1Q8N539 461 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 CNTD1Q8N815 330 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 NAT16Q8N8M0 369 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 C19orf47Q8N9M1 422 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 RBM15BQ8NDT2 890 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 CATSPER1Q8NEC5 780 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 NUP43Q8NFH3 380 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 SPATA22Q8NHS9 363 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 RP9Q8TA86 221 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 FAM45AQ8TCE6 357 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 STYXQ8WUJ0 223 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 KCTD4Q8WVF5 259 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 HMCESQ96FZ2 354 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC39A13Q96H72 371 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 PGLYRP2Q96PD5 576 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 JMJD8Q96S16 334 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 SORT1Q99523 831 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 RTKNQ9BST9 563 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 CINPQ9BW66 212 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 CCDC106Q9BWC9 280 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 MAGEH1Q9H213 219 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 MFSD1Q9H3U5 465 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 Q9H521 79 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 COG4Q9H9E3 785 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 CAB39LQ9H9S4 337 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 ARNT2Q9HBZ2 717 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 TNFRSF12AQ9NP84 129 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 ANLNQ9NQW6 1124 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 TMEM30AQ9NV96 361 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 PNPOQ9NVS9 261 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 SIRT5Q9NXA8 310 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 GTSE1Q9NYZ3 720 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 IL1RAPL1Q9NZN1 696 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 MPP6Q9NZW5 540 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 CPSF2Q9P2I0 782 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 EPS15L1Q9UBC2 864 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 XPR1Q9UBH6 696 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 CNOT6Q9ULM6 557 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 TMCO1Q9UM00 188 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 LRCH1Q9Y2L9 728 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 SF3B6Q9Y3B4 125 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 ZNF451Q9Y4E5 1061 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 IGLV3-10A0A075B6K4 115 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 E2F8A0AVK6 867 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 CCDC189A1A4V9 331 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 RGSL1A5PLK6 1076 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 VGLL3A8MV65 326 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 E9PBE3 544 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 G3V2L1 256 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 I6L893 689 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 PHGDHO43175 533 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 DCXO43602 365 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ITM2AO43736 263 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 KLHL41O60662 606 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 CLDN11O75508 207 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 CRCPO75575 148 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 RPP40O75818 363 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 PENKP01210 267 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 EPOP01588 193 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 AHSGP02765 367 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ITGB1P05556 798 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 PYGLP06737 847 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 HMBSP08397 361 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC35E2BP0CK96 405 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 HAPLN1P10915 354 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 COX4I1P13073 169 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 GNAZP19086 355 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 OGNP20774 298 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ATP6V1C1P21283 382 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 SDHBP21912 280 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 IGFBP6P24592 240 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 CTGFP29279 349 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ATP5C1P36542 298 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 GLRBP48167 497 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 PPP3CCP48454 512 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ALDH7A1P49419 539 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 CDH4P55283 916 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ACTR3P61158 418 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 IRX1P78414 480 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 XIAPP98170 497 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 MPP1Q00013 466 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 IRF9Q00978 393 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 KLC1Q07866 573 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 TBL3Q12788 808 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 TAF10Q12962 218 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ZNF177Q13360 481 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 CTBP1Q13363 440 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms