RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PCDHGA5Q9Y5G8 931 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 HS3ST3B1Q9Y662 390 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 COX11Q9Y6N1 276 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 ZFP37Q9Y6Q3 630 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-212ENST00000473961 COL11A2P13942 1736 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-212ENST00000473961 PI4K2BG5E9Z4 385 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 CCDC188H7C350 402 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 SLC16A5O15375 505 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 SYNCRIPO60506 623 aaKnown RBP4.22□□□□□ -1.73
BRCA1-212ENST00000473961 ATG13O75143 517 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 TADA2AO75478 443 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 VNN2O95498 520 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 FGBP02675 491 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 LINGO3P0C6S8 592 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 G6PDP11413 515 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 KELP23276 732 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 OAS2P29728 719 aaKnown RBP4.22□□□□□ -1.73
BRCA1-212ENST00000473961 MC5RP33032 325 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 PIGAP37287 484 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 BMXP51813 675 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 CAPZA1P52907 286 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 P2RX3P56373 397 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 HSPB3Q12988 150 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 PTPRCAPQ14761 206 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 MVPQ14764 893 aaKnown RBP4.22□□□□□ -1.73
BRCA1-212ENST00000473961 NR1D2Q14995 579 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 EZH2Q15910 746 aaKnown RBP4.22□□□□□ -1.73
BRCA1-212ENST00000473961 FAM98BQ52LJ0 330 aaKnown RBP4.22□□□□□ -1.73
BRCA1-212ENST00000473961 FSCBQ5H9T9 825 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 WASHC2DQ5SRD0 308 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 ASPHD1Q5U4P2 390 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 TMEM198Q66K66 360 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 TMEM211Q6ICI0 200 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 ANKRD54Q6NXT1 300 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 DCLRE1AQ6PJP8 1040 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 DLK2Q6UY11 383 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 MSANTD1Q6ZTZ1 278 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 MRPL10Q7Z7H8 261 aaKnown RBP4.22□□□□□ -1.73
BRCA1-212ENST00000473961 TMEM173Q86WV6 379 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-212ENST00000473961 ADGRG3Q86Y34 549 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 EMC1Q8N766 993 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 PI4KAP1Q8N8J0 262 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 MIGA1Q8NAN2 632 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 MSANTD4Q8NCY6 345 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 C7orf57Q8NEG2 295 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 GDAP1Q8TB36 358 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 GPT2Q8TD30 523 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 APBB2Q92870 758 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 TAAR8Q969N4 342 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 ERO1AQ96HE7 468 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 MS4A10Q96PG2 267 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 SEPHS2Q99611 448 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 NOL11Q9H8H0 719 aaKnown RBP4.22□□□□□ -1.73
BRCA1-212ENST00000473961 CLK4Q9HAZ1 481 aaKnown RBP4.22□□□□□ -1.73
BRCA1-212ENST00000473961 ADARB2Q9NS39 739 aaKnown RBP4.22□□□□□ -1.73
BRCA1-212ENST00000473961 SIRT3Q9NTG7 399 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-212ENST00000473961 SLC9A2Q9UBY0 812 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 SLC24A2Q9UI40 661 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-212ENST00000473961 RAI2Q9Y5P3 530 aa4.22□□□□□ -1.73
BRCA1-212ENST00000473961 ARHGEF40Q8TER5 1519 aa4.21□□□□□ -1.73
BRCA1-212ENST00000473961 TRAV34A0A0B4J273 112 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 A0A1W2PPC1 479 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 TMEM8BA6NDV4 472 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 KCNN4O15554 427 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 PLRG1O43660 514 aaKnown RBP4.21□□□□□ -1.74
BRCA1-212ENST00000473961 LDB2O43679 373 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 DIAPH2O60879 1101 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 NDUFB8O95169 186 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 ZWINTO95229 277 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 HOXD9P28356 352 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-212ENST00000473961 BDKRB2P30411 391 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 HSPA4P34932 840 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 EIF2S3P41091 472 aaKnown RBP4.21□□□□□ -1.74
BRCA1-212ENST00000473961 CCR10P46092 362 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 KRTAP10-6P60371 365 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-212ENST00000473961 SNRPEP62304 92 aaKnown RBP4.21□□□□□ -1.74
BRCA1-212ENST00000473961 GAGE2BQ13066 116 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 PTGR1Q14914 329 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 CDC37Q16543 378 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-212ENST00000473961 GLIPR1L2Q4G1C9 344 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 GAGE2EQ4V326 116 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 EFHC1Q5JVL4 640 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 PLA2G4FQ68DD2 849 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 HIST2H2BCQ6DN03 193 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 HIST2H2BDQ6DRA6 164 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 GAGE2AQ6NT46 116 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 DUS1LQ6P1R4 473 aaKnown RBP4.21□□□□□ -1.74
BRCA1-212ENST00000473961 SLC36A4Q6YBV0 504 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 DET1Q7L5Y6 550 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 CENPVQ7Z7K6 275 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-212ENST00000473961 GPR180Q86V85 440 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 ZC3HC1Q86WB0 502 aaKnown RBP4.21□□□□□ -1.74
BRCA1-212ENST00000473961 SNX32Q86XE0 403 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 CEP57Q86XR8 500 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 UNC45BQ8IWX7 931 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 CEP57L1Q8IYX8 460 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 FBXO39Q8N4B4 442 aa4.21□□□□□ -1.74
BRCA1-212ENST00000473961 PAPD5Q8NDF8 572 aaKnown RBP4.21□□□□□ -1.74
BRCA1-212ENST00000473961 RBM15BQ8NDT2 890 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms