RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 CTAGE15A4D2H0 777 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 ERI2A8K979 691 aaKnown RBP12.98□□□□□ -0.33
TPM3-216ENST00000473036 H3BM21 787 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 STX7O15400 261 aaKnown RBP12.98□□□□□ -0.33
TPM3-216ENST00000473036 PSMD3O43242 534 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 TMEM63AO94886 807 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 IVLP07476 585 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 CTAGE8P0CG41 777 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 ZNF8P17098 575 aaPredicted RBP12.98□□□□□ -0.33
TPM3-216ENST00000473036 AK4P27144 223 aaPredicted RBP12.98□□□□□ -0.33
TPM3-216ENST00000473036 SPAM1P38567 509 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 ADCY8P40145 1251 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 MAGEA6P43360 314 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 FNTAP49354 379 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 ACADVLP49748 655 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 CDKN1CP49918 316 aaPredicted RBP12.98□□□□□ -0.33
TPM3-216ENST00000473036 CLDN6P56747 220 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 GPS1Q13098 491 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 PYCR3Q53H96 274 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 ZNF572Q7Z3I7 529 aaPredicted RBP12.98□□□□□ -0.33
TPM3-216ENST00000473036 CTAGE6Q86UF2 777 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 ZNF547Q8IVP9 402 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 CTAGE4Q8IX94 777 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 AGGF1Q8N302 714 aaeCLIP12.98□□□□□ -0.331e-7■□□□□ 11.2
TPM3-216ENST00000473036 MDM1Q8TC05 714 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 DTX3LQ8TDB6 740 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 GPBAR1Q8TDU6 330 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 CPT1BQ92523 772 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 UBL7Q96S82 380 aaPredicted RBP12.98□□□□□ -0.33
TPM3-216ENST00000473036 BOCQ9BWV1 1114 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 FAM96AQ9H5X1 160 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 L2HGDHQ9H9P8 463 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 EIF2B3Q9NR50 452 aaKnown RBP12.98□□□□□ -0.33
TPM3-216ENST00000473036 SPATS2LQ9NUQ6 558 aaKnown RBP12.98□□□□□ -0.33
TPM3-216ENST00000473036 SLC2A6Q9UGQ3 507 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 MOSPD1Q9UJG1 213 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 RAXQ9Y2V3 346 aa12.98□□□□□ -0.33
TPM3-216ENST00000473036 GLYATL1P3A0A0U1RQE8 302 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 C2orf81A6NN90 581 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 AGAP14A8MT82 685 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 TNFSF14O43557 240 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 SGTAO43765 313 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 AVILO75366 819 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 LDOC1O95751 146 aaPredicted RBP12.97□□□□□ -0.33
TPM3-216ENST00000473036 EML2O95834 649 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 PYGLP06737 847 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 CDK4P11802 303 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 TPSB2P20231 275 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 KELP23276 732 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 IVDP26440 423 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 TNNT3P45378 269 aaPredicted RBP12.97□□□□□ -0.33
TPM3-216ENST00000473036 CRADDP78560 199 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 BASP1P80723 227 aaKnown RBP12.97□□□□□ -0.33
TPM3-216ENST00000473036 B4GALNT1Q00973 533 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 CTBSQ01459 385 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 CDH17Q12864 832 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 TPSAB1Q15661 275 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 SMAD1Q15797 465 aaKnown RBP12.97□□□□□ -0.33
TPM3-216ENST00000473036 INAVAQ3KP66 663 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 PDPK2PQ6A1A2 396 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 XKR5Q6UX68 686 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 C4orf22Q6V702 233 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 MAATS1Q7Z4T9 603 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 CAND1Q86VP6 1230 aaKnown RBP12.97□□□□□ -0.33
TPM3-216ENST00000473036 SLC35F3Q8IY50 421 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 FAM181AQ8N9Y4 354 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 OR13J1Q8NGT2 312 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 HNRNPLLQ8WVV9 542 aaKnown RBP12.97□□□□□ -0.33
TPM3-216ENST00000473036 VPS35Q96QK1 796 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 CDH19Q9H159 772 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 OR2AG1Q9H205 316 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 NLE1Q9NVX2 485 aaPredicted RBP12.97□□□□□ -0.33
TPM3-216ENST00000473036 FTSJ1Q9UET6 329 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 SLC23A2Q9UGH3 650 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 PCYOX1Q9UHG3 505 aa12.97□□□□□ -0.33
TPM3-216ENST00000473036 OR51F1A6NGY5 319 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 PRR19A6NJB7 356 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 E7EVH7 732 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 TPP1O14773 563 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 NDC80O14777 642 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 CHUKO15111 745 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 TP73O15350 636 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 NUAK1O60285 661 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 SRP72O76094 671 aaKnown RBP12.96□□□□□ -0.33
TPM3-216ENST00000473036 SLC25A14O95258 325 aaPredicted RBP12.96□□□□□ -0.33
TPM3-216ENST00000473036 PRAMEF1O95521 474 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 ASMTLO95671 621 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 CRTAMO95727 393 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 ACTN2P35609 894 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 LMAN1P49257 510 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 BLKP51451 505 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 MRPS25P82663 173 aaKnown RBP12.96□□□□□ -0.33
TPM3-216ENST00000473036 C19orf57Q0VDD7 668 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 GLE1Q53GS7 698 aaKnown RBP12.96□□□□□ -0.33
TPM3-216ENST00000473036 C6orf132Q5T0Z8 1188 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 GPRC6AQ5T6X5 926 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 SYDE1Q6ZW31 735 aaPredicted RBP12.96□□□□□ -0.33
TPM3-216ENST00000473036 C11orf96Q7Z7L8 435 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 LINC00523Q86TU6 105 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 MARCH9Q86YJ5 346 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms